RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 DHX33Q9H6R0 707 aaKnown RBP18.62■□□□□ 0.57
CLIP2-201ENST00000223398 LIMD1Q9UGP4 676 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 CROTQ9UKG9 612 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 POLR1DQ9Y2S0 133 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 ROBO3Q96MS0 1386 aa18.62■□□□□ 0.57
CLIP2-201ENST00000223398 FZD9O00144 591 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 ZNF844Q08AG5 666 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 USP39Q53GS9 565 aaKnown RBP18.61■□□□□ 0.57
CLIP2-201ENST00000223398 LUZP2Q86TE4 346 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 OR52K2Q8NGK3 314 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 OR14C36Q8NHC7 312 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 TBC1D14Q9P2M4 693 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 RABGEF1Q9UJ41 708 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 KLHL20Q9Y2M5 609 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 TNPO3Q9Y5L0 923 aaKnown RBP18.61■□□□□ 0.57
CLIP2-201ENST00000223398 MRASO14807 208 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 CLDN11O75508 207 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 NFATC1O95644 943 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 TLX1P31314 330 aaPredicted RBP18.61■□□□□ 0.57
CLIP2-201ENST00000223398 KHDRBS2Q5VWX1 349 aaKnown RBP18.61■□□□□ 0.57
CLIP2-201ENST00000223398 CIR1Q86X95 450 aaPredicted RBP18.61■□□□□ 0.57
CLIP2-201ENST00000223398 C2orf73Q8N5S3 287 aaPredicted RBP18.61■□□□□ 0.57
CLIP2-201ENST00000223398 LRRC39Q96DD0 335 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 PCDH18Q9HCL0 1135 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 RERGQ96A58 199 aaPredicted RBP18.61■□□□□ 0.57
CLIP2-201ENST00000223398 VPS45Q9NRW7 570 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 PPIEQ9UNP9 301 aaKnown RBP18.61■□□□□ 0.57
CLIP2-201ENST00000223398 FAM220BPB1ANY3 271 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 OPLAHO14841 1288 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 SCAMP1O15126 338 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 DCXO43602 365 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 NAGLUP54802 743 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 XKR6Q5GH73 641 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 KCTD4Q8WVF5 259 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 PCED1BQ96HM7 432 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 ZFP14Q9HCL3 533 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 STK39Q9UEW8 545 aa18.61■□□□□ 0.57
CLIP2-201ENST00000223398 ZNF214Q9UL59 606 aaPredicted RBP18.61■□□□□ 0.57
CLIP2-201ENST00000223398 PEX11AO75192 247 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 CNPP09543 421 aaKnown RBP18.6■□□□□ 0.57
CLIP2-201ENST00000223398 NAB1Q13506 487 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 ITIH4Q14624 930 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 LRRC49Q8IUZ0 686 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 NSMCE2Q96MF7 247 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 PCDHB18PQ96TA0 734 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 COPS8Q99627 209 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 LZTS1Q9Y250 596 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 RCCD1A6NED2 376 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 HOXB8P17481 243 aaPredicted RBP18.6■□□□□ 0.57
CLIP2-201ENST00000223398 SULT2A1Q06520 285 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 GSTA3Q16772 222 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 LCLAT1Q6UWP7 414 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 TMC5Q6UXY8 1006 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 CYP2R1Q6VVX0 501 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 SIX5Q8N196 739 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 POMGNT2Q8NAT1 580 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 P2RY11Q96G91 374 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 ARHGAP28Q9P2N2 729 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 FAM237AA0A1B0GTK4 181 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 FPGSQ05932 587 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 KLC1Q07866 573 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 AP5B1Q2VPB7 878 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 OTUD3Q5T2D3 398 aaPredicted RBP18.6■□□□□ 0.57
CLIP2-201ENST00000223398 ZNF618Q5T7W0 954 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 TMEM132CQ8N3T6 1108 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 SLC4A5Q9BY07 1137 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 SLIT3O75094 1523 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 IGLV3-22A0A075B6J6 115 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 KANSL1LA0AUZ9 987 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 C4BPAP04003 597 aaKnown RBP18.6■□□□□ 0.57
CLIP2-201ENST00000223398 ADRA1BP35368 520 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 FLT3P36888 993 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 PRMT2P55345 433 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 COMMD2Q86X83 199 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 RASAL3Q86YV0 1011 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 AUTS2Q8WXX7 1259 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 OR10H2O60403 315 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 GUCY1B2O75343 617 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 KRT8P05787 483 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 C8AP07357 584 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 HSMCR30P0CW71 290 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 TACR2P21452 398 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 CCND3P30281 292 aaPredicted RBP18.6■□□□□ 0.57
CLIP2-201ENST00000223398 CRATP43155 626 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 TRIP4Q15650 581 aaPredicted RBP18.6■□□□□ 0.57
CLIP2-201ENST00000223398 BBS12Q6ZW61 710 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 OTOP3Q7RTS5 596 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 OR4L1Q8NH43 312 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 ATL1Q8WXF7 558 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 SNX27Q96L92 541 aa18.6■□□□□ 0.57
CLIP2-201ENST00000223398 AGO3Q9H9G7 860 aaKnown RBP18.6■□□□□ 0.57
CLIP2-201ENST00000223398 DDX28Q9NUL7 540 aaKnown RBP18.6■□□□□ 0.57
CLIP2-201ENST00000223398 NCANO14594 1321 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 FCHO1O14526 889 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 KPNA5O15131 536 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 PTPN2P17706 415 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 EPORP19235 508 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 CYP4F8P98187 520 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 CDK16Q00536 496 aa18.59■□□□□ 0.57
CLIP2-201ENST00000223398 CAPRIN2Q6IMN6 1127 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms