RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 PPM1LQ5SGD2 360 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 PDZD4Q76G19 769 aaPredicted RBP16.11■□□□□ 0.17
SF3A2-201ENST00000221494 GALNT4Q8N4A0 578 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 ANKFN1Q8N957 763 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 SMYD1Q8NB12 490 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 ANKRD52Q8NB46 1076 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 WNT8BQ93098 351 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 PBXIP1Q96AQ6 731 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 ZNF669Q96BR6 464 aaPredicted RBP16.11■□□□□ 0.17
SF3A2-201ENST00000221494 VPS50Q96JG6 964 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 WDR55Q9H6Y2 383 aaPredicted RBP16.11■□□□□ 0.17
SF3A2-201ENST00000221494 ZNF358Q9NW07 568 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 VANGL2Q9ULK5 521 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 FZD10Q9ULW2 581 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 FAF1Q9UNN5 650 aaPredicted RBP16.11■□□□□ 0.17
SF3A2-201ENST00000221494 MYO18AQ92614 2054 aaKnown RBP16.11■□□□□ 0.17
SF3A2-201ENST00000221494 A0A087WXM4 84 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 ZCWPW2A0A1B0GU75 182 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 TRIM64A6NGJ6 449 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 C9IYK1 514 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 MLH1P40692 756 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 GRM5P41594 1212 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 GRIA4P48058 902 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 CD97P48960 835 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 RGS7P49802 495 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 PRMT2P55345 433 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 PKNOX1P55347 436 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 PUS10Q3MIT2 529 aaKnown RBP16.11■□□□□ 0.17
SF3A2-201ENST00000221494 DCAF4L1Q3SXM0 396 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 ARL13AQ5H913 290 aaPredicted RBP16.11■□□□□ 0.17
SF3A2-201ENST00000221494 LHX8Q68G74 356 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 KRT80Q6KB66 452 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 KLHL35Q6PF15 583 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 SERINC5Q86VE9 423 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 AFAP1L2Q8N4X5 818 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 MFSD2AQ8NA29 543 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 SLAIN1Q8ND83 568 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 ZNF420Q8TAQ5 688 aaPredicted RBP16.11■□□□□ 0.17
SF3A2-201ENST00000221494 RHBDL2Q9NX52 303 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 RRN3Q9NYV6 651 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 TLK1Q9UKI8 766 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 DERAQ9Y315 318 aa16.11■□□□□ 0.17
SF3A2-201ENST00000221494 TRIM24O15164 1050 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 NCAM2O15394 837 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 DPP6P42658 865 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 SCNN1BP51168 640 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 GALK1P51570 392 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 KPNA2P52292 529 aaKnown RBP16.1■□□□□ 0.17
SF3A2-201ENST00000221494 PSME3P61289 254 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 GK3PQ14409 553 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 PSMD5Q16401 504 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 ZBED5Q49AG3 693 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 PPP1R26Q5T8A7 1209 aaPredicted RBP16.1■□□□□ 0.17
SF3A2-201ENST00000221494 PPP4R4Q6NUP7 873 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 NOTUMQ6P988 496 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 SLC27A1Q6PCB7 646 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 CHSY3Q70JA7 882 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 RNF180Q86T96 592 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 COLGALT2Q8IYK4 626 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 RNF168Q8IYW5 571 aaPredicted RBP16.1■□□□□ 0.17
SF3A2-201ENST00000221494 PELI3Q8N2H9 469 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 SGF29Q96ES7 293 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 VPS39Q96JC1 886 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 FCRL3Q96P31 734 aaPredicted RBP16.1■□□□□ 0.17
SF3A2-201ENST00000221494 C1QTNF1Q9BXJ1 281 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 FTHL17Q9BXU8 183 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 COPG1Q9Y678 874 aaKnown RBP16.1■□□□□ 0.17
SF3A2-201ENST00000221494 SCN10AQ9Y5Y9 1956 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 BRCA2P51587 3418 aa16.1■□□□□ 0.17
SF3A2-201ENST00000221494 HEATR9A2RTY3 570 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 MFSD11O43934 449 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 LTFP02788 710 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 HNRNPCP07910 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
SF3A2-201ENST00000221494 BMP2P12643 396 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 TPP2P29144 1249 aaPredicted RBP16.09■□□□□ 0.17
SF3A2-201ENST00000221494 EPHA3P29320 983 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 AXLP30530 894 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 GRK4P32298 578 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 DNAJB13P59910 316 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 MRPS6P82932 125 aaKnown RBP16.09■□□□□ 0.17
SF3A2-201ENST00000221494 TMED1Q13445 227 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 SQLEQ14534 574 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 UGP2Q16851 508 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 INTS6LQ5JSJ4 861 aaKnown RBP16.09■□□□□ 0.17
SF3A2-201ENST00000221494 PIWIL4Q7Z3Z4 852 aaKnown RBP16.09■□□□□ 0.17
SF3A2-201ENST00000221494 PATL1Q86TB9 770 aaKnown RBP16.09■□□□□ 0.17
SF3A2-201ENST00000221494 ZNF567Q8N184 647 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 TMEM151AQ8N4L1 468 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 RANBP9Q96S59 729 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 EIF2AQ9BY44 585 aaKnown RBP16.09■□□□□ 0.17
SF3A2-201ENST00000221494 SNX25Q9H3E2 840 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 RHOJQ9H4E5 214 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 COQ10BQ9H8M1 238 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 OLAHQ9NV23 265 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 DPP3Q9NY33 737 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.09■□□□□ 0.17
SF3A2-201ENST00000221494 PCDHGA7Q9Y5G6 932 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 THSD7BQ9C0I4 1608 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 C7orf72A4D263 438 aa16.09■□□□□ 0.17
SF3A2-201ENST00000221494 TARM1B6A8C7 271 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms