RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 SH3RF2Q8TEC5 729 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 STYXQ8WUJ0 223 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 DPF3Q92784 378 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 MRGPRX2Q96LB1 330 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 GBP5Q96PP8 586 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 ACBD6Q9BR61 282 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 RTKNQ9BST9 563 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 MCMBPQ9BTE3 642 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 KLHL4Q9C0H6 718 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 TNFRSF12AQ9NP84 129 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 IPO11Q9UI26 975 aaKnown RBP14.79□□□□□ -0.04
CNOT3-201ENST00000221232 KCTD3Q9Y597 815 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 HS3ST4Q9Y661 456 aa14.79□□□□□ -0.04
CNOT3-201ENST00000221232 MATN3O15232 486 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 ANXA9O76027 345 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 SLC4A1P02730 911 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 GRK4P32298 578 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 MTTPP55157 894 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 WNT3AP56704 352 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 MS4A2Q01362 244 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 SATB1Q01826 763 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 NEPROQ6NW34 567 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 FAM171BQ6P995 826 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 LAYNQ6UX15 382 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 CIR1Q86X95 450 aaPredicted RBP14.78□□□□□ -0.04
CNOT3-201ENST00000221232 FCRL5Q96RD9 977 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 OLFM1Q99784 485 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 NEU3Q9UQ49 428 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 ATP6AP2A0A1C7CYW4 349 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 E9PAM4 449 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 ATP6AP2O75787 350 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 CNTN5O94779 1100 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 CD86P42081 329 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 DPP6P42658 865 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 PRKAA1Q13131 559 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 MMEL1Q495T6 779 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 AAGABQ6PD74 315 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 CD300LGQ6UXG3 332 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 GK5Q6ZS86 529 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 TRIM67Q6ZTA4 783 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 PDSS2Q86YH6 399 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 MIB1Q86YT6 1006 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 RSPH1Q8WYR4 309 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 GPR78Q96P69 363 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 TSPAN18Q96SJ8 248 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 SENP6Q9GZR1 1112 aaPredicted RBP14.78□□□□□ -0.04
CNOT3-201ENST00000221232 ARHGEF38Q9NXL2 777 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 RRN3Q9NYV6 651 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 CRYL1Q9Y2S2 319 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 GIT1Q9Y2X7 761 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 TCAF1Q9Y4C2 921 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 HTTP42858 3142 aa14.78□□□□□ -0.04
CNOT3-201ENST00000221232 PIRTP0C851 137 aa14.77□□□□□ -0.04
CNOT3-201ENST00000221232 CD151P48509 253 aa14.77□□□□□ -0.04
CNOT3-201ENST00000221232 ZNF157P51786 506 aaPredicted RBP14.77□□□□□ -0.04
CNOT3-201ENST00000221232 PPP1R3AQ16821 1122 aa14.77□□□□□ -0.04
CNOT3-201ENST00000221232 OSBPL2Q9H1P3 480 aa14.77□□□□□ -0.04
CNOT3-201ENST00000221232 COPS7BQ9H9Q2 264 aaPredicted RBP14.77□□□□□ -0.04
CNOT3-201ENST00000221232 ADA2Q9NZK5 511 aa14.77□□□□□ -0.04
CNOT3-201ENST00000221232 PRG3Q9Y2Y8 225 aaPredicted RBP14.77□□□□□ -0.04
CNOT3-201ENST00000221232 H3BNX3 289 aa14.77□□□□□ -0.05
CNOT3-201ENST00000221232 CCDC166P0CW27 439 aa14.77□□□□□ -0.05
CNOT3-201ENST00000221232 HAPLN1P10915 354 aaPredicted RBP14.77□□□□□ -0.05
CNOT3-201ENST00000221232 TSPY1Q01534 308 aa14.77□□□□□ -0.05
CNOT3-201ENST00000221232 DSC2Q02487 901 aa14.77□□□□□ -0.05
CNOT3-201ENST00000221232 SLC10A7Q0GE19 358 aa14.77□□□□□ -0.05
CNOT3-201ENST00000221232 FLOT2Q14254 428 aa14.77□□□□□ -0.05
CNOT3-201ENST00000221232 ZNF280BQ86YH2 543 aa14.77□□□□□ -0.05
CNOT3-201ENST00000221232 GALNT4Q8N4A0 578 aa14.77□□□□□ -0.05
CNOT3-201ENST00000221232 B3GALT6Q96L58 329 aa14.77□□□□□ -0.05
CNOT3-201ENST00000221232 CATSPERBQ9H7T0 1116 aa14.77□□□□□ -0.05
CNOT3-201ENST00000221232 RRAGCQ9HB90 399 aa14.77□□□□□ -0.05
CNOT3-201ENST00000221232 COPG1Q9Y678 874 aaKnown RBP14.77□□□□□ -0.05
CNOT3-201ENST00000221232 RALGAPA2Q2PPJ7 1873 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 KCNU1A8MYU2 1149 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 GPR182O15218 404 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 B4GALT3O60512 393 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 AKR1A1P14550 325 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 VCLP18206 1134 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 CTGFP29279 349 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 RPL9P32969 192 aaKnown RBP14.76□□□□□ -0.05
CNOT3-201ENST00000221232 RGS2P41220 211 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 GEMP55040 296 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 NME5P56597 212 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 GRIK3Q13003 919 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 CEACAM7Q14002 265 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 RASIP1Q5U651 963 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 THEM5Q8N1Q8 247 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 PPP2R3CQ969Q6 453 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 IL12RB2Q99665 862 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 MTG1Q9BT17 334 aaPredicted RBP14.76□□□□□ -0.05
CNOT3-201ENST00000221232 ABCC13Q9NSE7 274 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 PCDHGB4Q9UN71 923 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 ANKRD6Q9Y2G4 727 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 PCDHGB5Q9Y5G0 923 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 TARM1B6A8C7 271 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 APOA4P06727 396 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 CPB1P15086 417 aa14.76□□□□□ -0.05
CNOT3-201ENST00000221232 PPARGP37231 505 aaPredicted RBP14.76□□□□□ -0.05
CNOT3-201ENST00000221232 EFEMP1Q12805 493 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms