RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 SAMHD1Q9Y3Z3 626 aaKnown RBP17.32■□□□□ 0.36
ITGB4-201ENST00000200181 CDC40O60508 579 aaKnown RBP eCLIP17.32■□□□□ 0.36
ITGB4-201ENST00000200181 ATP5F1P24539 256 aaPredicted RBP17.32■□□□□ 0.36
ITGB4-201ENST00000200181 RPL3P39023 403 aaKnown RBP17.32■□□□□ 0.36
ITGB4-201ENST00000200181 HUNKP57058 714 aa17.32■□□□□ 0.36
ITGB4-201ENST00000200181 GCNT1Q02742 428 aa17.32■□□□□ 0.36
ITGB4-201ENST00000200181 CRELD2Q6UXH1 353 aaPredicted RBP17.32■□□□□ 0.36
ITGB4-201ENST00000200181 BRSK2Q8IWQ3 736 aa17.32■□□□□ 0.36
ITGB4-201ENST00000200181 DSELQ8IZU8 1212 aa17.32■□□□□ 0.36
ITGB4-201ENST00000200181 SLC47A1Q96FL8 570 aa17.32■□□□□ 0.36
ITGB4-201ENST00000200181 DMTF1Q9Y222 760 aa17.32■□□□□ 0.36
ITGB4-201ENST00000200181 MRPL42Q9Y6G3 142 aaKnown RBP17.32■□□□□ 0.36
ITGB4-201ENST00000200181 SHROOM2Q13796 1616 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 ARHGEF33A8MVX0 844 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 LOC110117498-PIK3R3F6TDL0 507 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 PRODHO43272 600 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 PTPN5P54829 565 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 NAA20P61599 178 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 KCNA10Q16322 511 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 DAW1Q8N136 415 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 SLC4A5Q9BY07 1137 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 ZDHHC6Q9H6R6 413 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 MOXD2PA6NHM9 499 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 UBE2Q2LH0YL09 131 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 SERPINA4P29622 427 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 CDK9P50750 372 aaKnown RBP17.31■□□□□ 0.36
ITGB4-201ENST00000200181 RPL38P63173 70 aaKnown RBP17.31■□□□□ 0.36
ITGB4-201ENST00000200181 GRB14Q14449 540 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 ELMO3Q96BJ8 720 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 ZNF354BQ96LW1 612 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 OXCT2Q9BYC2 517 aaPredicted RBP17.31■□□□□ 0.36
ITGB4-201ENST00000200181 GPN1Q9HCN4 374 aaPredicted RBP17.31■□□□□ 0.36
ITGB4-201ENST00000200181 FBXO6Q9NRD1 293 aaPredicted RBP17.31■□□□□ 0.36
ITGB4-201ENST00000200181 RBMX2Q9Y388 322 aaKnown RBP17.31■□□□□ 0.36
ITGB4-201ENST00000200181 RAB27AP51159 221 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 NAGLUP54802 743 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 POLNQ7Z5Q5 900 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 YTHDF3Q7Z739 585 aaKnown RBP17.31■□□□□ 0.36
ITGB4-201ENST00000200181 ATL1Q8WXF7 558 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 A0A0B4J269 797 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 ZNF286BP0CG31 522 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 PSMB4P28070 264 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 ZNF135P52742 658 aaPredicted RBP17.31■□□□□ 0.36
ITGB4-201ENST00000200181 SCRN3Q0VDG4 424 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 GALNT3Q14435 633 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 TCEA2Q15560 299 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 INSCQ1MX18 579 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 OR52K1Q8NGK4 314 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 NEK7Q8TDX7 302 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 LENG9Q96B70 501 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 RHOBTB2Q9BYZ6 727 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 PRDM16Q9HAZ2 1276 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 POPDC2Q9HBU9 364 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 ZFP14Q9HCL3 533 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 OR10H1Q9Y4A9 318 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 DISP1Q96F81 1524 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 PXDNLA1KZ92 1463 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 KPNA3O00505 521 aaPredicted RBP17.31■□□□□ 0.36
ITGB4-201ENST00000200181 FFAR3O14843 346 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 GPR42O15529 346 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 ZSCAN5DPP0CG00 497 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 RPS12P25398 132 aaKnown RBP17.31■□□□□ 0.36
ITGB4-201ENST00000200181 RIPK1Q13546 671 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 EML3Q32P44 896 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 DET1Q7L5Y6 550 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 SLC2A14Q8TDB8 520 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 BORCS5Q969J3 196 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 AKAP7Q9P0M2 348 aaPredicted RBP17.31■□□□□ 0.36
ITGB4-201ENST00000200181 PPP2R3BQ9Y5P8 575 aa17.31■□□□□ 0.36
ITGB4-201ENST00000200181 KDELR1P24390 212 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 CAP2P40123 477 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 PALB2Q86YC2 1186 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 KIAA0895Q8NCT3 520 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 DGCR14Q96DF8 476 aaKnown RBP17.3■□□□□ 0.36
ITGB4-201ENST00000200181 BTRCQ9Y297 605 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 DHRS7Q9Y394 339 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 CELF2O95319 508 aaKnown RBP17.3■□□□□ 0.36
ITGB4-201ENST00000200181 NADKO95544 446 aaPredicted RBP17.3■□□□□ 0.36
ITGB4-201ENST00000200181 UGT1A5P35504 534 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 PTCHD4Q6ZW05 846 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 SMIM5Q71RC9 77 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 CYP4X1Q8N118 509 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 PGLYRP2Q96PD5 576 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 ELOVL4Q9GZR5 314 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 AP4B1Q9Y6B7 739 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 DDX3XO00571 662 aaKnown RBP eCLIP17.3■□□□□ 0.36
ITGB4-201ENST00000200181 TFECO14948 347 aaPredicted RBP17.3■□□□□ 0.36
ITGB4-201ENST00000200181 ZBTB11O95625 1053 aaPredicted RBP17.3■□□□□ 0.36
ITGB4-201ENST00000200181 DHFRP00374 187 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 LYNP07948 512 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.3■□□□□ 0.36
ITGB4-201ENST00000200181 PIH1D2Q8WWB5 315 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 MROH8Q9H579 483 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 CHP2O43745 196 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 TRIM3O75382 744 aaPredicted RBP17.3■□□□□ 0.36
ITGB4-201ENST00000200181 PTPN1P18031 435 aaKnown RBP17.3■□□□□ 0.36
ITGB4-201ENST00000200181 CLCN5P51795 746 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 APTXQ7Z2E3 356 aaKnown RBP17.3■□□□□ 0.36
ITGB4-201ENST00000200181 AMIGO2Q86SJ2 522 aa17.3■□□□□ 0.36
ITGB4-201ENST00000200181 TRPV1Q8NER1 839 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms