RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 STT3AP46977 705 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 ARHGAP8P85298 464 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 MAP3K21Q5TCX8 1036 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 DCP1BQ8IZD4 617 aaKnown RBP13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 KCTD4Q8WVF5 259 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 LRRC40Q9H9A6 602 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 USP29Q9HBJ7 922 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 TMEM30AQ9NV96 361 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 CNTN6Q9UQ52 1028 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 FAM50BQ9Y247 325 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 ERI2A8K979 691 aaKnown RBP13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 CKMP06732 381 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 NMBRP28336 390 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 CYP2C18P33260 490 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 CCR10P46092 362 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 ACLYP53396 1101 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 MPP1Q00013 466 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 COL9A2Q14055 689 aaPredicted RBP13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 RALGPS1Q5JS13 557 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 DENND1CQ8IV53 801 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 DDIASQ8IXT1 998 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 FTHL17Q9BXU8 183 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 CNTN3Q9P232 1028 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 PLA2G4CQ9UP65 541 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 C9JVG2 144 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 CHADO15335 359 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 IL4RP24394 825 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 C10orf107Q8IVU9 208 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 CARNMT1Q8N4J0 409 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 PPHLN1Q8NEY8 458 aaKnown RBP13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 USP13Q92995 863 aaPredicted RBP13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 CERS2Q96G23 380 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 CORO1BQ9BR76 489 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 CDH9Q9ULB4 789 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 WDR37Q9Y2I8 494 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 ACTL7AQ9Y615 435 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 V9GYQ6 96 aa13.07□□□□□ -0.32
PCDHB4-201ENST00000194152 TPST1O60507 370 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 GMNNO75496 209 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 ABHD2P08910 425 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 CDK4P11802 303 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 GJA1P17302 382 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 YWHAQP27348 245 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 FDFT1P37268 417 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 GRIA2P42262 883 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 ESRRGP62508 458 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 FKBP1BP68106 108 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 NRF1Q16656 503 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 ESRP1Q6NXG1 681 aaKnown RBP13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 CAND1Q86VP6 1230 aaKnown RBP13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 DEFB107AQ8IZN7 70 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 TOP6BLQ8N6T0 577 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 WDR55Q9H6Y2 383 aaPredicted RBP13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 CATSPERBQ9H7T0 1116 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 EURLQ9NYK6 297 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 NEMP2A6NFY4 417 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 CA12O43570 354 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 HNRNPLP14866 589 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 HOXD12P35452 270 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 SLC1A6P48664 564 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 COPAP53621 1224 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 IRF9Q00978 393 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 ANKRD20A4Q4UJ75 823 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 MARC1Q5VT66 337 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 ARHGAP17Q68EM7 881 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 NAPEPLDQ6IQ20 393 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 NPWQ8N729 165 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 FZD10Q9ULW2 581 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 RPL26L1Q9UNX3 145 aaKnown RBP13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 TRIP12Q14669 1992 aaPredicted RBP13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 GLRA3O75311 464 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 SUPT7LO94864 414 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 F9P00740 461 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 GFAPP14136 432 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 PAMP19021 973 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 PPM1FP49593 454 aaPredicted RBP13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 ENTPD1P49961 510 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 ZBTB17Q13105 803 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 SCIMPQ6UWF3 145 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 ZDHHC17Q8IUH5 632 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 CLVS1Q8IUQ0 354 aaPredicted RBP13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 NIPA2Q8N8Q9 360 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 ZFP28Q8NHY6 868 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 SLC44A1Q8WWI5 657 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 TMEM169Q96HH4 297 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 EBF4Q9BQW3 602 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 FAM96AQ9H5X1 160 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 NDFIP2Q9NV92 336 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 TAGLN3Q9UI15 199 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 PCDHB5Q9Y5E4 795 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 GMEB1Q9Y692 573 aa13.06□□□□□ -0.32
PCDHB4-201ENST00000194152 MOXD2PA6NHM9 499 aa13.05□□□□□ -0.32
PCDHB4-201ENST00000194152 NOL3O60936 208 aaKnown RBP13.05□□□□□ -0.32
PCDHB4-201ENST00000194152 SORBS2O94875 1100 aaKnown RBP13.05□□□□□ -0.32
PCDHB4-201ENST00000194152 INHAP05111 366 aa13.05□□□□□ -0.32
PCDHB4-201ENST00000194152 CDH13P55290 713 aa13.05□□□□□ -0.32
PCDHB4-201ENST00000194152 DSC2Q02487 901 aa13.05□□□□□ -0.32
PCDHB4-201ENST00000194152 C14orf80Q86SX3 495 aa13.05□□□□□ -0.32
PCDHB4-201ENST00000194152 PSTKQ8IV42 348 aaKnown RBP13.05□□□□□ -0.32
PCDHB4-201ENST00000194152 SIX5Q8N196 739 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms