RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SNAP91O60641 907 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ZMPSTE24O75844 475 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CD160O95971 181 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 POU2F2P09086 479 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CSKP41240 450 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 MPPE1Q53F39 396 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ANKRD42Q8N9B4 389 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ALG14Q96F25 216 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 MLXIPLQ9NP71 852 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 VPS28Q9UK41 221 aa19.92■□□□□ 0.78
TNFRSF1A-201ENST00000162749 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SOBPA7XYQ1 873 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 KRT4P19013 534 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 RGRP47804 291 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 NRIP1P48552 1158 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SMAD1Q15797 465 aaKnown RBP19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 PCID2Q5JVF3 399 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 RNF43Q68DV7 783 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 MARK2Q7KZI7 788 aaKnown RBP19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CDKL2Q92772 493 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ZSWIM3Q96MP5 696 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SMC6Q96SB8 1091 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CLEC4EQ9ULY5 219 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 EYSQ5T1H1 3165 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CCDC85CA6NKD9 419 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 VIMP08670 466 aaKnown RBP19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ERVK-10P10266 1014 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 NMBRP28336 390 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SLC1A5Q15758 541 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ZNF449Q6P9G9 518 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 LINGO4Q6UY18 593 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SLC25A41Q8N5S1 370 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 EXOC2Q96KP1 924 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 GDF15Q99988 308 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 HAUS2Q9NVX0 235 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ZFATQ9P243 1243 aa19.91■□□□□ 0.78
TNFRSF1A-201ENST00000162749 EPOPA6NHQ4 379 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CEBPBP17676 345 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CR2P20023 1033 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 MGAT5Q09328 741 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SF3A3Q12874 501 aaKnown RBP eCLIP19.9■□□□□ 0.783e-6■■■□□ 16.5
TNFRSF1A-201ENST00000162749 FRG1Q14331 258 aaKnown RBP19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 DUSP6Q16828 381 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ELMSAN1Q6PJG2 1045 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CCDC121Q6ZUS5 278 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 C12orf76Q8N812 135 aaPredicted RBP19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CCDC197Q8NCU1 140 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ING5Q8WYH8 240 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CCT6BQ92526 530 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 ELAC2Q9BQ52 826 aaKnown RBP19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 PSAT1Q9Y617 370 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CAPN7Q9Y6W3 813 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 LOC285095A0A1B0GVY8 99 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CCDC78A2IDD5 438 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SPAG7O75391 227 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 KRT37O76014 449 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 SERPINF2P08697 491 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CBX2Q14781 532 aaPredicted RBP19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CYTH1Q15438 398 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 FYB2Q5VWT5 728 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 PKN3Q6P5Z2 889 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 DCAF4L2Q8NA75 395 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 CKAP2Q8WWK9 683 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 VPS51Q9UID3 782 aa19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 MRPS23Q9Y3D9 190 aaKnown RBP19.9■□□□□ 0.78
TNFRSF1A-201ENST00000162749 HMX2A2RU54 273 aa19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ZNF197O14709 1029 aa19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ATXN1LP0C7T5 689 aaKnown RBP19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ACTN3Q08043 901 aaPredicted RBP19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 MSLNQ13421 630 aaPredicted RBP19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 KCNC3Q14003 757 aa19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ZNF77Q15935 545 aa19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 TMC5Q6UXY8 1006 aa19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 VN1R2Q8NFZ6 395 aa19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 PTCD2Q8WV60 388 aaKnown RBP19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 DYDC1Q8WWB3 177 aa19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SMG7Q92540 1137 aaKnown RBP19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 NSMCE3Q96MG7 304 aa19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 LMAN2LQ9H0V9 348 aa19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 PIDD1Q9HB75 910 aa19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 NOD2Q9HC29 1040 aa19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 MSRAQ9UJ68 235 aa19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ZMYM5Q9UJ78 669 aa19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 TCAF1Q9Y4C2 921 aa19.89■□□□□ 0.77
TNFRSF1A-201ENST00000162749 FAM47DPA6NHR8 397 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 TCP11X1B4DZS4 312 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 TRIM49D1C9J1S8 452 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 GOLGA8RI6L899 631 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 PRPF4O43172 522 aaKnown RBP eCLIP19.88■□□□□ 0.775e-7■■■■□ 24.8
TNFRSF1A-201ENST00000162749 TYROBPO43914 113 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 KRT38O76015 456 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 TMCC1O94876 653 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SNRPAP09012 282 aaKnown RBP19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SERPINH1P50454 418 aaKnown RBP19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 SCNN1BP51168 640 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 NAB1Q13506 487 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 RASSF3Q86WH2 238 aa19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 ARID3BQ8IVW6 561 aaPredicted RBP19.88■□□□□ 0.77
TNFRSF1A-201ENST00000162749 APCDD1Q8J025 514 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms