RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Arhgap17Q3UIA2 846 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Tmem237Q3V0J1 427 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Srbd1Q497V5 1015 aaKnown RBP18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 ADGRF3Q58Y75 991 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Heatr9Q5QNV8 569 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Nemp1Q6ZQE4 437 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Olfr538Q7TRT5 310 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Wbp1lQ8BGW2 348 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Zcchc4Q8BKW4 512 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Slc17a6Q8BLE7 582 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 RtknQ8C6B2 564 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Zbtb8bQ8CII0 484 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Ugt2b1Q8R084 529 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Igkv18-36A0A075B5M9 114 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Spin2dB1B0R2 236 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Plk2P53351 682 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 AdslP54822 484 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Acot8P58137 320 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Tubgcp3P58854 905 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Tmem26Q3UP23 366 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Pla2g4dQ50L43 825 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Abcd2Q61285 741 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Tas2r125Q7M710 311 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Usp8Q80U87 1080 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Pqlc1Q80XM9 271 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Zbtb41Q811F1 908 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Slc36a3Q811P0 477 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Rap2cQ8BU31 183 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Zfp398Q8BV16 643 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Ipo11Q8K2V6 975 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Cnot6Q8K3P5 557 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Pcolce2Q8R4W6 414 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Adcy4Q91WF3 1077 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Pdia5Q921X9 517 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Stk33Q924X7 491 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Ecrg4Q99LS0 148 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Vps28Q9D1C8 221 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 TheglQ9DA15 459 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Dcaf6Q9DC22 876 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Rmdn1Q9DCV4 305 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Rab13Q9DD03 202 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Hey2Q9QUS4 339 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Apobec2Q9WV35 224 aa18.51■□□□□ 0.55
Trim47-202ENSMUST00000106441 Gm13276A0A087WR18 182 aa18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 NuggcD3YWJ0 796 aa18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 PpargP37238 505 aa18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 Vps45P97390 570 aa18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 Upf3aQ3ULJ3 422 aa18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 Rbm20Q3UQS8 1199 aaKnown RBP18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 Vwa2Q70UZ7 791 aa18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 Il17reQ8BH06 637 aa18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 Clic5Q8BXK9 251 aa18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 Clip4Q8CI96 704 aa18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 Nup85Q8R480 656 aaKnown RBP18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 Vps11Q91W86 941 aaKnown RBP18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 Afg3l1Q920A7 789 aaKnown RBP18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 LiasQ99M04 373 aa18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 Clca1Q9D7Z6 913 aa18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 Plxna1P70206 1894 aa18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 Plin4O88492 1403 aa18.5■□□□□ 0.55
Trim47-202ENSMUST00000106441 Phf11A6H5X4 337 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Gm281D3Z1Y0 860 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Dpy19l2P0CW70 773 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Lmo2P25801 158 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Tmprss15P97435 1069 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Adcy6Q01341 1165 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Trcg1Q58Y74 825 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 UrgcpQ5NCI0 926 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Tmem199Q5SYH2 208 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 PtprjQ64455 1238 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Slco6c1Q8C0X7 706 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Irak3Q8K4B2 609 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Pcdhb18Q91Y02 792 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Gtf2ird2Q99NI3 936 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Psmd12Q9D8W5 456 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Tbc1d21Q9D9D3 336 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Il20Q9JKV9 176 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Bmp15Q9Z0L4 392 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Armt1A6H630 439 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Gm28043E0CXC2 719 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Kdelc2G5E897 503 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Olfr743L7N1Y2 311 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Matn2O08746 956 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Pbx3O35317 434 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Rdh7O88451 316 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Brcc3P46737 291 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Smad1P70340 465 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 SiaeP70665 541 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Fbp2P70695 339 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Polr1bP70700 1135 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Atxn7l3bQ3UD01 97 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Slc22a16Q497L8 649 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 HltfQ6PCN7 1003 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Lyve1Q8BHC0 318 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Znf689Q8BKK5 500 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Rd3Q8BRE0 195 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 GancQ8BVW0 898 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Acad10Q8K370 1069 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Slc13a3Q91Y63 600 aa18.49■□□□□ 0.55
Trim47-202ENSMUST00000106441 Mtfr1Q99MB2 328 aa18.49■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms