RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 1700034I23RikQ9D9Q3 184 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 TfebQ9R210 475 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Olfr1164A2AVT5 326 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gtf2h4O70422 463 aaKnown RBP9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 GzmeP08884 248 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Tnnc2P20801 160 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 GcP21614 476 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Emilin3P59900 758 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Adra1bP97717 514 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 F8a1Q00558 380 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 ZbbxQ0P5X5 716 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Itga1Q3V3R4 1179 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Lrrc47Q505F5 581 aaKnown RBP9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gm12185Q5NCB2 835 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 FancbQ5XJY6 703 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Prkd1Q62101 918 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Jak3Q62137 1100 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ces3aQ63880 571 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Fbxo11Q7TPD1 930 aaKnown RBP9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Olfr1252Q7TQZ2 314 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Trim65Q8BFW4 522 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Mettl3Q8C3P7 580 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 TbcelQ8C5W3 424 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Sdhaf2Q8C6I2 164 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Pabpc5Q8C7D3 381 aaKnown RBP9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Mark4Q8CIP4 752 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Acap1Q8K2H4 740 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Mcoln3Q8R4F0 553 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ces3bQ8VCU1 571 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Rpn1Q91YQ5 608 aaKnown RBP9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 PrkxQ922R0 355 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Tma16Q9CR02 221 aaKnown RBP9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 MceeQ9D1I5 178 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 AgkQ9ESW4 421 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Tm9sf3Q9ET30 587 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Plscr3Q9JIZ9 296 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ccdc86Q9JJ89 426 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Nectin1Q9JKF6 515 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Tnfsf13bQ9WU72 309 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Spin2dB1B0R2 236 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Sec14l5B2RXM5 696 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Pgbd1E9Q492 415 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Vmn2r67K7N6T2 851 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 RapsnP12672 412 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Fgl2P12804 432 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Fcer2P20693 331 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gsx2P31316 305 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 TubP50586 505 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Apoa1Q00623 264 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 GsapQ3TCV3 858 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 B3gnt6Q3USF0 391 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Sorbs2Q3UTJ2 1180 aaKnown RBP9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Defa17Q64016 82 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Krt40Q6IFX3 439 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Lats2Q7TSJ6 1042 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Tbc1d22bQ80VE5 505 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Katnb1Q8BG40 658 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 TiprlQ8BH58 271 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Taf2Q8C176 1104 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Kat5Q8CHK4 513 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ago2Q8CJG0 860 aaKnown RBP9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Swi5Q8K3D3 89 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gprc6aQ8K4Z6 928 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Plbd1Q8VCI0 550 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Olfr615Q8VGY4 313 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Creld1Q91XD7 420 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Glra3Q91XP5 464 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Q9CQF4 240 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Lrp2bpQ9D4C6 346 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 ParvgQ9ERD8 331 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Mapk11Q9WUI1 364 aa9.83□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Sbno2Q7TNB8 1349 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gm42688A0A0R3P9D1 673 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gm29133A0A1B0GT72 266 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 4930469K13RikA0A286YDB2 92 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 TriqkB2B9E1 86 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gm19965J3QNY8 723 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Dmp1O55188 503 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 AvilO88398 819 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cpa3P15089 417 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Cyp19a1P28649 503 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Hsd17b2P51658 381 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Nfe2Q07279 373 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Igflr1Q3U4N7 345 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Arhgef9Q3UTH8 516 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 PtprrQ62132 656 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Dpysl3Q62188 570 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Pla2g4cQ64GA5 597 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 BC061212Q6P8K3 481 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Gja6Q6S5G4 283 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Slc39a14Q75N73 489 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Tor4aQ8BH02 426 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Klf8Q8BLM0 355 aaKnown RBP9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Slc46a2Q8CA03 479 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Ccdc142Q8CAI1 738 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Zmiz2Q8CIE2 920 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Slc45a3Q8K0H7 553 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Vmn1r206Q8R277 312 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Idh3bQ91VA7 384 aa9.82□□□□□ -0.84
Hmgb1-201ENSMUST00000085546 Dyrk3Q922Y0 586 aa9.82□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms