RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Gpd2Q64521 727 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Lrif1Q8CDD9 755 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Pop1Q8K205 1045 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Tmem150aQ91WN2 271 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 MntO08789 591 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rgl2Q61193 778 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Fbxl21Q8BFZ4 434 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Slc35a5Q921R7 437 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Vnn3Q9QZ25 500 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ccdc149F6V035 524 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 JchainP01592 159 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ag2Q3UPL5 249 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Znf821Q6PD05 413 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Enpp4Q8BTJ4 456 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Nuak2Q8BZN4 639 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gimap3Q99MI6 301 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Trim2Q9ESN6 744 aaKnown RBP16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 PtprmP28828 1452 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Dlg5E9Q9R9 1921 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Serpinb5P70124 375 aaKnown RBP16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gjb4Q02738 266 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ssxb3Q6XAS4 170 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Trim69Q80X56 500 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Adgrg1Q8K209 687 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Sv2aQ9JIS5 742 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Grm2Q14BI2 872 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 LbpQ61805 481 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Txndc8Q69AB2 127 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Hspbap1Q8BK58 483 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Actr3Q99JY9 418 aaKnown RBP16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ttyh1Q9D3A9 450 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Dennd6bQ9D9V7 585 aa16.73■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Adamts7Q68SA9 1657 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Pramel3A2AHA7 463 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 PpigA2AR02 752 aaKnown RBP16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gm7903A2AWL1 463 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Smyd5Q3TYX3 416 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Dnajc14Q921R4 703 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 PcnaP17918 261 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Pydc3Q3V3Q4 588 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Kcnh1Q60603 989 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Senp5Q6NXL6 749 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Atp6v1g3Q8BMC1 118 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Slc18a2Q8BRU6 517 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gprc6aQ8K4Z6 928 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 PllpQ9DCU2 182 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 PargO88622 969 aaKnown RBP16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Emilin3P59900 758 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Syn2Q64332 586 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Olfr412Q7TRW7 312 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 TdrpQ8C5P7 182 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 KyQ8C8H8 661 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Kat5Q8CHK4 513 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Mcoln2Q8K595 566 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Necab2Q91ZP9 389 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 MispQ9D279 648 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Cul2Q9D4H8 745 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gsdmdc1Q9D8T2 487 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gdap2Q9DBL2 498 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Arfip1G5E8V9 373 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Prl2a1Q9JHK0 228 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 DgkdE9PUQ8 1220 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Siglec10Q80ZE3 688 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 CercamA3KGW5 592 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Cap1P40124 474 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ica1P97411 478 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 PoliQ6R3M4 717 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Tmem59lQ7TNI2 337 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Bnc2Q8BMQ3 1127 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Mark4Q8CIP4 752 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Zcchc12Q9CZA5 402 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Cntd1Q9D995 334 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Atp6v0d1P51863 351 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 CtskP55097 329 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Las2Q8CB14 526 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Kdelc1Q9JHP7 502 aa16.72■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Ssxb9A2BI93 185 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gm340F6RGI3 1242 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Kcnj2P35561 428 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Usp46P62069 366 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Tgfbrap1Q3UR70 860 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Tab3Q571K4 716 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Chtf18Q8BIW9 969 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 ScaiQ8C8N2 606 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 NwcQ9CQI4 244 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gm7086A0A1W2P766 342 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Trmt1lA2RSY6 728 aaKnown RBP16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Klra3Q64329 266 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Rap2cQ8BU31 183 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Gm3095E9Q058 166 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Mylk4Q5SUV5 386 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 FdxrQ61578 494 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Olfr805Q8VFI4 319 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Nsmce2Q91VT1 247 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 GmfbQ9CQI3 142 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Med11Q9D8C6 117 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Phf11A6H5X4 337 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Vmn2r27D3YUK6 857 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 MaffO54791 156 aa16.71■□□□□ 0.27
Ccdc88a-201ENSMUST00000040182 Magea6O89010 325 aa16.71■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 52.8 ms