RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Dnaja2Q9QYJ0 412 aa23.35■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Gm8906L7N2A2 181 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Tp53i13Q5F267 385 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Glp2rQ5IXF8 512 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Orm1Q60590 207 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Zfp57Q8C6P8 421 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 HnrnplQ8R081 586 aaKnown RBP23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Mcoln3Q8R4F0 553 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Pcdhb10Q91VE5 797 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Dsg1bQ7TSF1 1060 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Olfr449Q8VGW8 311 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Osbpl3Q9DBS9 855 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ica1P97411 478 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Grm1P97772 1199 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Smyd5Q3TYX3 416 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Pik3c3Q6PF93 887 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Pgrmc2Q80UU9 217 aaKnown RBP23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ccdc17Q8CE13 565 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 MtpapQ9D0D3 585 aaKnown RBP23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Taf1dQ9D4V4 322 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Tmem176aQ9DCS1 244 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Wnt8bQ9WUD6 350 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Atn1O35126 1175 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Slc2a2P14246 523 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 4930502E18RikQ14BQ3 236 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ntrk1Q3UFB7 799 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Pcdhga10Q91XY9 930 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Scnn1bQ9WU38 638 aa23.34■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Glyatl3E9Q5L8 290 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Fgf10O35565 209 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Snai1Q02085 264 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 CltbQ6IRU5 229 aaKnown RBP23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 NwcQ9CQI4 244 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Kifc5bE9PUA5 672 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 JundP15066 341 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Adra1dP97714 562 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 RadilQ69Z89 1099 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Ptpn7Q8BUM3 359 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 HyiQ8R1F5 277 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Pcdha1Q91Y21 948 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Dhtkd1A2ATU0 921 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Hoxc6P10629 235 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Cbx3P23198 183 aaKnown RBP23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Tmem65Q4VAE3 234 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Zfp78Q5U406 512 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Atl1Q8BH66 558 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Setdb2Q8C267 713 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Pacs1Q8K212 961 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Znf609Q8BZ47 1413 aa23.33■■□□□ 1.33
Sh3rf1-201ENSMUST00000034060 Trpv5P69744 723 aa23.33■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Catsper4Q8BVN3 442 aa23.33■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Tspan8Q8R3G9 235 aa23.33■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Tmbim4Q9DA39 238 aa23.33■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Rdh14Q9ERI6 334 aa23.33■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 AuhQ9JLZ3 314 aa23.33■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Fkbp9Q9Z247 570 aa23.33■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 PpigA2AR02 752 aaKnown RBP23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Cyp2j13Q3UNV4 503 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Adora2aQ60613 410 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Hbs1lQ69ZS7 682 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Tsen15Q8R3W5 168 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Cpt1bQ924X2 772 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Cyb561d2Q9WUE3 222 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Dnmt1P13864 1620 aaKnown RBP23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Azin1O35484 448 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Lsm3P62311 102 aaKnown RBP23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Ngly1Q9JI78 651 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 NrlP54846 237 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Mylk4Q5SUV5 386 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Cyp4b1Q64462 511 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Colec12Q8K4Q8 742 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 2010005H15RikQ9D8D6 97 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Gm7945F6QI24 236 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Gm21319F6YNI8 144 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Idh2P54071 452 aaKnown RBP23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Nek10Q3UGM2 1111 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Alg10bQ3UGP8 474 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Fdxacb1Q3UY23 622 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Stard3Q61542 446 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Olfr23Q7TRX4 325 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Olfr389Q7TRX7 312 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Aldh4a1Q8CHT0 562 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 DhddsQ99KU1 333 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 PpidQ9CR16 370 aaKnown RBP23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Gm5751A2AHC8 147 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Pold1P52431 1105 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Rpl26P61255 145 aaKnown RBP23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 GscQ02591 256 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Spag16Q8K450 639 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Olfr1502Q8VG66 316 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Sntg2Q925E0 539 aa23.32■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Pramef6A2A8M8 474 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Vmn2r67K7N6T2 851 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Htr2cP34968 459 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Sesn1P58006 492 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Znf473Q8BI67 892 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Mettl21cQ8BLU2 248 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Q8BWQ6 963 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Adgrg1Q8K209 687 aa23.31■■□□□ 1.32
Sh3rf1-201ENSMUST00000034060 Slc22a19Q8VCA0 551 aa23.31■■□□□ 1.32
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms