RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 CNBD2Q96M20 576 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 UBE2OQ9C0C9 1292 aaKnown RBP14.01□□□□□ -0.17
PHGDH-233ENST00000642021 VILLO15195 856 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 ME2P23368 584 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 MYBPC1Q00872 1141 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 SLC5A9Q2M3M2 681 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 ITPRIPL1Q6GPH6 555 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 IYDQ6PHW0 289 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 RPS27LQ71UM5 84 aaKnown RBP14.01□□□□□ -0.17
PHGDH-233ENST00000642021 BHLHA9Q7RTU4 235 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 PCED1BQ96HM7 432 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 WDCPQ9H6R7 721 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 GNEQ9Y223 722 aaKnown RBP14.01□□□□□ -0.17
PHGDH-233ENST00000642021 ANKRD6Q9Y2G4 727 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 ACOT9Q9Y305 439 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 RAD54BQ9Y620 910 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 PRSS51A0A1B0GVH4 220 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 RRN3P2A6NIE6 340 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 RNASEH2AO75792 299 aaKnown RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 HNRNPLP14866 589 aaKnown RBP eCLIP14□□□□□ -0.17
PHGDH-233ENST00000642021 DYNC1I2Q13409 638 aaKnown RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 ART3Q13508 389 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 RARS2Q5T160 578 aaKnown RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 MFSD4BQ5TF39 518 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 NAPEPLDQ6IQ20 393 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 DENND5AQ6IQ26 1287 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 EPAS1Q99814 870 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 EFCAB1Q9HAE3 211 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 VCX3AQ9NNX9 186 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 TNFRSF12AQ9NP84 129 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 MID2Q9UJV3 735 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 RALGAPA2Q2PPJ7 1873 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 SMIM31A0A1B0GVY4 71 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 C9IYK1 514 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 AURKAO14965 403 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 DYNC1LI2O43237 492 aaPredicted RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 BCAS2O75934 225 aaPredicted RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 SRGAP2BP0DMP2 458 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 ATP6V1B1P15313 513 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 HDCP19113 662 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 ARCN1P48444 511 aaKnown RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 AIF1P55008 147 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 GJA9P57773 515 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 PKN3Q6P5Z2 889 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 CNSTQ6PJW8 725 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 GK5Q6ZS86 529 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 KDELC2Q7Z4H8 507 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 PTAR1Q7Z6K3 402 aaPredicted RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 PCDH20Q8N6Y1 951 aaKnown RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 TXNDC5Q8NBS9 432 aaKnown RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 HMGCLL1Q8TB92 370 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 OSBPL2Q9H1P3 480 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 FIS1Q9Y3D6 152 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 SHROOM3Q8TF72 1996 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 A0A1B0GTW7 788 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 FAM95CA0A1B0GW59 222 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 KCNU1A8MYU2 1149 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 SDHDO14521 159 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 TREHO43280 583 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 MTSS1O43312 755 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 TPD52L2O43399 206 aaKnown RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 XPOTO43592 962 aaKnown RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 CLPTM1O96005 669 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 HADHAP40939 763 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 TAS2R39P59534 338 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 RAB10P61026 200 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 INTS6LQ5JSJ4 861 aaKnown RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 SH2D4BQ5SQS7 431 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 RBM44Q6ZP01 1051 aaKnown RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 FAM35AQ86V20 835 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 TMEM102Q8N9M5 508 aaPredicted RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 IPMKQ8NFU5 416 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 PIP4K2CQ8TBX8 421 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 LENG1Q96BZ8 264 aaPredicted RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 PGAP3Q96FM1 320 aaPredicted RBP14□□□□□ -0.17
PHGDH-233ENST00000642021 TSNARE1Q96NA8 513 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 VAT1Q99536 393 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 BRD8Q9H0E9 1235 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 ATXN3LQ9H3M9 355 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 VTI1BQ9UEU0 232 aa14□□□□□ -0.17
PHGDH-233ENST00000642021 SMIM35A0A1B0GVV1 85 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 MBLAC1A4D2B0 266 aaPredicted RBP13.99□□□□□ -0.17
PHGDH-233ENST00000642021 HHLA1C9JL84 531 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 TADA2AO75478 443 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 KCNA5P22460 613 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 ARL13BQ3SXY8 428 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 NADK2Q4G0N4 442 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 RAB41Q5JT25 222 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 PRAMEF19Q5SWL8 479 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 IL23RQ5VWK5 629 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 ZFP1Q6P2D0 407 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 SNX31Q8N9S9 440 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 PDCD6IPQ8WUM4 868 aaKnown RBP13.99□□□□□ -0.17
PHGDH-233ENST00000642021 HEXDCQ8WVB3 486 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 ATP6V1E2Q96A05 226 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 DGCR14Q96DF8 476 aaKnown RBP13.99□□□□□ -0.17
PHGDH-233ENST00000642021 SENP8Q96LD8 212 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 PCDHAC1Q9H158 963 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 CNGB3Q9NQW8 809 aa13.99□□□□□ -0.17
PHGDH-233ENST00000642021 RAB26Q9ULW5 256 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms