RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 MAN2B1O00754 1011 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 DNALI1O14645 258 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-230ENST00000641927 ANXA9O76027 345 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 SEC31AO94979 1220 aaKnown RBP17.71■□□□□ 0.43
PHGDH-230ENST00000641927 MT-CYBP00156 380 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-230ENST00000641927 GOLGA6DP0CG33 693 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 IVDP26440 423 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 SNRPD1P62314 119 aaKnown RBP17.71■□□□□ 0.43
PHGDH-230ENST00000641927 NIPAL4Q0D2K0 466 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 C2orf27AQ580R0 203 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 ZNF852Q6ZMS4 543 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 PCGF5Q86SE9 256 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 CHPFQ8IZ52 775 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 PCDH20Q8N6Y1 951 aaKnown RBP17.71■□□□□ 0.43
PHGDH-230ENST00000641927 PDCD7Q8N8D1 485 aaKnown RBP17.71■□□□□ 0.43
PHGDH-230ENST00000641927 BBOF1Q8ND07 529 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 OR2AP1Q8NGE2 309 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 IMP4Q96G21 291 aaKnown RBP17.71■□□□□ 0.43
PHGDH-230ENST00000641927 MYO19Q96H55 970 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 NOD2Q9HC29 1040 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 GOLGA6AQ9NYA3 693 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 THAP10Q9P2Z0 257 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-230ENST00000641927 MUTYHQ9UIF7 546 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 ANAPC5Q9UJX4 755 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 AAR2Q9Y312 384 aaKnown RBP17.71■□□□□ 0.43
PHGDH-230ENST00000641927 STARD13Q9Y3M8 1113 aa17.71■□□□□ 0.43
PHGDH-230ENST00000641927 INSIG1O15503 277 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 PMPCBO75439 489 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 ZNF821O75541 412 aaPredicted RBP17.71■□□□□ 0.42
PHGDH-230ENST00000641927 HLA-EP13747 358 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 ITIH2P19823 946 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 ITGA8P53708 1063 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 NSUN2Q08J23 767 aaKnown RBP eCLIP17.71■□□□□ 0.42
PHGDH-230ENST00000641927 SEMA5AQ13591 1074 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 HLTFQ14527 1009 aaKnown RBP eCLIP17.71■□□□□ 0.42
PHGDH-230ENST00000641927 E2F5Q15329 346 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 ELF2Q15723 593 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 PCSK7Q16549 785 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 CARD16Q5EG05 197 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 PPIL6Q8IXY8 311 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 UBALD2Q8IYN6 164 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 ARRDC2Q8TBH0 407 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 CPT1BQ92523 772 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 OXNAD1Q96HP4 312 aaPredicted RBP17.71■□□□□ 0.42
PHGDH-230ENST00000641927 NECAB3Q96P71 396 aaPredicted RBP17.71■□□□□ 0.42
PHGDH-230ENST00000641927 PPP1R2P1Q96PQ5 205 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 NUDCD1Q96RS6 583 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 ACOX2Q99424 681 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 MTG2Q9H4K7 406 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 FAM114A2Q9NRY5 505 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 CACNA2D2Q9NY47 1150 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 WHRNQ9P202 907 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 HECAQ9UBI9 543 aaPredicted RBP17.71■□□□□ 0.42
PHGDH-230ENST00000641927 WNT16Q9UBV4 365 aa17.71■□□□□ 0.42
PHGDH-230ENST00000641927 WASH3PC4AMC7 463 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 SERPINF2P08697 491 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 CR2P20023 1033 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 IL12RB1P42701 662 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 WASP42768 502 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 VASPP50552 380 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-230ENST00000641927 GEMP55040 296 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 PLTPP55058 493 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 PRKCQQ04759 706 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 RNASEH2BQ5TBB1 312 aaKnown RBP17.7■□□□□ 0.42
PHGDH-230ENST00000641927 KDELC2Q7Z4H8 507 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 SRLQ86TD4 932 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 PRPF39Q86UA1 669 aaKnown RBP17.7■□□□□ 0.42
PHGDH-230ENST00000641927 SIX5Q8N196 739 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 GPR161Q8N6U8 529 aaKnown RBP17.7■□□□□ 0.42
PHGDH-230ENST00000641927 KDM1BQ8NB78 822 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 IPMKQ8NFU5 416 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 FRS2Q8WU20 508 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 GORASP1Q9BQQ3 440 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 MLPHQ9BV36 600 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-230ENST00000641927 FSD1LQ9BXM9 530 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 CD320Q9NPF0 282 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 GDF3Q9NR23 364 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 GRHL1Q9NZI5 618 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 FAM153AQ9UHL3 310 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 EVLQ9UI08 416 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-230ENST00000641927 HCN2Q9UL51 889 aa17.7■□□□□ 0.42
PHGDH-230ENST00000641927 GOLGA8MH3BSY2 632 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 NDC80O14777 642 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 GSRP00390 522 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 MMP2P08253 660 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 CES1P23141 567 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 KIR2DL1P43626 348 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-230ENST00000641927 CCNHP51946 323 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-230ENST00000641927 DRG2P55039 364 aaKnown RBP17.69■□□□□ 0.42
PHGDH-230ENST00000641927 SPARCL1Q14515 664 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 ANKRD22Q5VYY1 191 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 ALG1LQ6GMV1 187 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 DPY19L3Q6ZPD9 716 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 PAF1Q8N7H5 531 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 SEC14L1Q92503 715 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 ERLEC1Q96DZ1 483 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 SHDQ96IW2 340 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 STON1Q9Y6Q2 735 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 F5P12259 2224 aa17.69■□□□□ 0.42
PHGDH-230ENST00000641927 EDDM13A0A1B0GTR0 161 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms