RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	ODF2L	Q9ULJ1	636 aa		6.65	□□□□□ -1.35
CASC19-238	ENST00000641523	SMG5	Q9UPR3	1016 aa	Known RBP	6.65	□□□□□ -1.35
CASC19-238	ENST00000641523	GDA	Q9Y2T3	454 aa		6.65	□□□□□ -1.35
CASC19-238	ENST00000641523	WDFY4	Q6ZS81	3184 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	SMIM28	A0A1B0GU29	152 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	FAM170A	A1A519	330 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	ARHGEF37	A1IGU5	675 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	SYNDIG1L	A6NDD5	238 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	TTC36	A6NLP5	189 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523		E9PMD0	336 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	SYN3	O14994	580 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	CLDN3	O15551	220 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	ARHGAP6	O43182	974 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	PLOD3	O60568	738 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	FTH1P19	P0C7X4	201 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	RAP2A	P10114	183 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	BRAF	P15056	766 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	KCNE1	P15382	129 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	HOXC13	P31276	330 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	LONP1	P36776	959 aa	Known RBP	6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	CLCN5	P51795	746 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	SP140	Q13342	867 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	CNGA2	Q16280	664 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	RNF151	Q2KHN1	245 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	VMAC	Q2NL98	169 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	GAGE13	Q4V321	117 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	PPM1L	Q5SGD2	360 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	NT5DC1	Q5TFE4	455 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	PDZD4	Q76G19	769 aa	Predicted RBP	6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	PALB2	Q86YC2	1186 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	LIX1L	Q8IVB5	337 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	CMTM4	Q8IZR5	234 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	DAW1	Q8N136	415 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	DACT3	Q96B18	629 aa	Predicted RBP	6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	PPP1R10	Q96QC0	940 aa	Known RBP	6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	PLEKHA5	Q9HAU0	1116 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	SLAMF7	Q9NQ25	335 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	IFT80	Q9P2H3	777 aa	Predicted RBP	6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	MAFF	Q9ULX9	164 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	DUSP12	Q9UNI6	340 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	TDRD15	B5MCY1	1934 aa	Known RBP	6.64	□□□□□ -1.35
CASC19-238	ENST00000641523	MYO10	Q9HD67	2058 aa		6.64	□□□□□ -1.35
CASC19-238	ENST00000641523		A0A087WV62	115 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	POM121B	A6NF01	834 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	TCAF2	A6NFQ2	919 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	PP2D1	A8MPX8	630 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523		F8W810	466 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523		H7C4K7	107 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	AREL1	O15033	823 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	SLC16A4	O15374	487 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	TBCA	O75347	108 aa	Known RBP	6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	CLTA	P09496	248 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	PLA2G4B	P0C869	781 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	PROZ	P22891	400 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	AVPR2	P30518	371 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	GALNS	P34059	522 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	HOXD12	P35452	270 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	MAPK7	Q13164	816 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	NAB2	Q15742	525 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	UPP1	Q16831	310 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	TMEM119	Q4V9L6	283 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	XKR4	Q5GH76	650 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	FAM209B	Q5JX69	171 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	FAM26F	Q5R3K3	315 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	C4orf50	Q6ZRC1	276 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	MTSS1L	Q765P7	747 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	PLXDC1	Q8IUK5	500 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	TMEM161B	Q8NDZ6	487 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	APPL2	Q8NEU8	664 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	LNX1	Q8TBB1	728 aa	Predicted RBP	6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	HASPIN	Q8TF76	798 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	ZNF707	Q96C28	371 aa	Predicted RBP	6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	BICD1	Q96G01	975 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	LCOR	Q96JN0	433 aa	Predicted RBP	6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	FAM84A	Q96KN4	292 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	SNX27	Q96L92	541 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	RTP3	Q9BQQ7	232 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	NUDT16L1	Q9BRJ7	211 aa	Known RBP	6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	MMTAG2	Q9BU76	263 aa	Known RBP	6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	ENKD1	Q9H0I2	346 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	C11orf54	Q9H0W9	315 aa	Predicted RBP	6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	PARVG	Q9HBI0	331 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	MOCS1	Q9NZB8	636 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	ANKFY1	Q9P2R3	1169 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	MTRR	Q9UBK8	725 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	WNT16	Q9UBV4	365 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	CDH22	Q9UJ99	828 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	SPTBN4	Q9H254	2564 aa		6.63	□□□□□ -1.35
CASC19-238	ENST00000641523	F5	P12259	2224 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	C9orf118	A6NHY6	69 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523		F8W8V4	182 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	PODXL	O00592	558 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	HNRNPDL	O14979	420 aa	Known RBP	6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	RFPL2	O75678	378 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	C8A	P07357	584 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	C1QTNF9	P0C862	333 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	RPL17	P18621	184 aa	Known RBP	6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	CDC25A	P30304	524 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	ELF1	P32519	619 aa		6.62	□□□□□ -1.35
CASC19-238	ENST00000641523	MATR3	P43243	847 aa	Known RBP eCLIP	6.62	□□□□□ -1.35	6e-7	■■■□□ 16

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms