RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 EBF2Q9HAK2 575 aa27.1■■□□□ 1.93
VEGFA-231ENST00000640499 SP110Q9HB58 689 aa27.1■■□□□ 1.93
VEGFA-231ENST00000640499 GOLGA6L3A6NEY3 463 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 ZNF487B1APH4 448 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 PLRG1O43660 514 aaKnown RBP27.09■■□□□ 1.93
VEGFA-231ENST00000640499 GJB3O75712 270 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 MAP3K6O95382 1288 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 POP4O95707 220 aaKnown RBP27.09■■□□□ 1.93
VEGFA-231ENST00000640499 GALNT2Q10471 571 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 SFSWAPQ12872 951 aaKnown RBP27.09■■□□□ 1.93
VEGFA-231ENST00000640499 ZFYVE27Q5T4F4 411 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 KIAA0895LQ68EN5 471 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 MFSD7Q6UXD7 560 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 VSIG1Q86XK7 387 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 RYBPQ8N488 228 aaPredicted RBP27.09■■□□□ 1.93
VEGFA-231ENST00000640499 PLD5Q8N7P1 536 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 OR2T34Q8NGX1 318 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 OR14C36Q8NHC7 312 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 LRRN4Q8WUT4 740 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 HDAC8Q9BY41 377 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 ADGRG1Q9Y653 693 aa27.09■■□□□ 1.93
VEGFA-231ENST00000640499 GRID2IPA4D2P6 1211 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 FAM47DPA6NHR8 397 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 GOLGA6L6A8MZA4 724 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 KRIT1O00522 736 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 SLC7A4O43246 635 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 GDF9O60383 454 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 PALMO75781 387 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 KRT1P04264 644 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 IRX4P78413 519 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 DAAM2Q86T65 1068 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 KIAA1328Q86T90 577 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 LRRC8AQ8IWT6 810 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 PGBD5Q8N414 524 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 GPR161Q8N6U8 529 aaKnown RBP27.08■■□□□ 1.93
VEGFA-231ENST00000640499 GDAP1L1Q96MZ0 367 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 EIF2B4Q9UI10 523 aaKnown RBP27.08■■□□□ 1.93
VEGFA-231ENST00000640499 DOCK9Q9BZ29 2069 aa27.08■■□□□ 1.93
VEGFA-231ENST00000640499 SHROOM3Q8TF72 1996 aa27.08■■□□□ 1.92
VEGFA-231ENST00000640499 PSTPIP1O43586 416 aa27.07■■□□□ 1.92
VEGFA-231ENST00000640499 FSBPO95073 299 aa27.07■■□□□ 1.92
VEGFA-231ENST00000640499 ITGB7P26010 798 aa27.07■■□□□ 1.92
VEGFA-231ENST00000640499 SERPINB6P35237 376 aa27.07■■□□□ 1.92
VEGFA-231ENST00000640499 PPP2CBP62714 309 aa27.07■■□□□ 1.92
VEGFA-231ENST00000640499 PPP2CAP67775 309 aa27.07■■□□□ 1.92
VEGFA-231ENST00000640499 SLC9A4Q6AI14 798 aa27.07■■□□□ 1.92
VEGFA-231ENST00000640499 ERN2Q76MJ5 926 aaKnown RBP27.07■■□□□ 1.92
VEGFA-231ENST00000640499 PARS2Q7L3T8 475 aaKnown RBP27.07■■□□□ 1.92
VEGFA-231ENST00000640499 LRIG1Q96JA1 1093 aa27.07■■□□□ 1.92
VEGFA-231ENST00000640499 FSCN3Q9NQT6 498 aa27.07■■□□□ 1.92
VEGFA-231ENST00000640499 DDX56Q9NY93 547 aaKnown RBP27.07■■□□□ 1.92
VEGFA-231ENST00000640499 MEI4A8MW99 385 aa27.06■■□□□ 1.92
VEGFA-231ENST00000640499 IGSF6O95976 241 aa27.06■■□□□ 1.92
VEGFA-231ENST00000640499 UGT2B4P06133 528 aa27.06■■□□□ 1.92
VEGFA-231ENST00000640499 HOXD12P35452 270 aa27.06■■□□□ 1.92
VEGFA-231ENST00000640499 GARSP41250 739 aaKnown RBP27.06■■□□□ 1.92
VEGFA-231ENST00000640499 CDKN2BP42772 138 aa27.06■■□□□ 1.92
VEGFA-231ENST00000640499 CCZ1BP86790 482 aa27.06■■□□□ 1.92
VEGFA-231ENST00000640499 CCZ1P86791 482 aaPredicted RBP27.06■■□□□ 1.92
VEGFA-231ENST00000640499 RFTN1Q14699 578 aaPredicted RBP27.06■■□□□ 1.92
VEGFA-231ENST00000640499 LBRQ14739 615 aaKnown RBP27.06■■□□□ 1.92
VEGFA-231ENST00000640499 WDR45BQ5MNZ6 344 aa27.06■■□□□ 1.92
VEGFA-231ENST00000640499 SYCP2LQ5T4T6 812 aa27.06■■□□□ 1.92
VEGFA-231ENST00000640499 SLC23A3Q6PIS1 610 aa27.06■■□□□ 1.92
VEGFA-231ENST00000640499 RGL4Q8IZJ4 473 aa27.06■■□□□ 1.92
VEGFA-231ENST00000640499 ZNF599Q96NL3 588 aa27.06■■□□□ 1.92
VEGFA-231ENST00000640499 DTLQ9NZJ0 730 aa27.06■■□□□ 1.92
VEGFA-231ENST00000640499 LRRC72A6NJI9 287 aa27.05■■□□□ 1.92
VEGFA-231ENST00000640499 CSNK1DP48730 415 aa27.05■■□□□ 1.92
VEGFA-231ENST00000640499 ADCY2Q08462 1091 aa27.05■■□□□ 1.92
VEGFA-231ENST00000640499 ZNF805Q5CZA5 627 aa27.05■■□□□ 1.92
VEGFA-231ENST00000640499 TRIM61Q5EBN2 209 aa27.05■■□□□ 1.92
VEGFA-231ENST00000640499 TMCO4Q5TGY1 634 aa27.05■■□□□ 1.92
VEGFA-231ENST00000640499 KATNAL2Q8IYT4 538 aa27.05■■□□□ 1.92
VEGFA-231ENST00000640499 ATPAF2Q8N5M1 289 aa27.05■■□□□ 1.92
VEGFA-231ENST00000640499 CALR3Q96L12 384 aaKnown RBP27.05■■□□□ 1.92
VEGFA-231ENST00000640499 KLHL32Q96NJ5 620 aa27.05■■□□□ 1.92
VEGFA-231ENST00000640499 PSKH2Q96QS6 385 aa27.05■■□□□ 1.92
VEGFA-231ENST00000640499 CPEB1Q9BZB8 566 aaKnown RBP27.05■■□□□ 1.92
VEGFA-231ENST00000640499 KDM4CQ9H3R0 1056 aa27.05■■□□□ 1.92
VEGFA-231ENST00000640499 CAPN10Q9HC96 672 aa27.05■■□□□ 1.92
VEGFA-231ENST00000640499 PCDH15Q96QU1 1955 aa27.05■■□□□ 1.92
VEGFA-231ENST00000640499 PLXNA2O75051 1894 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 LNP1A1A4G5 178 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 TTC24A2A3L6 582 aaPredicted RBP27.04■■□□□ 1.92
VEGFA-231ENST00000640499 C16orf96A6NNT2 1141 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 SPINT1O43278 529 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 PIGNO95427 931 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 ABL2P42684 1182 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 CCR5P51681 352 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 NSUN2Q08J23 767 aaKnown RBP eCLIP27.04■■□□□ 1.92
VEGFA-231ENST00000640499 LLGL1Q15334 1064 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 DUOXA1Q1HG43 343 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 GDPD4Q6W3E5 623 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 SPOCD1Q6ZMY3 1216 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 SRLQ86TD4 932 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 TEX26Q8N6G2 289 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 TSGA13Q96PP4 275 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 MIR1-1HGQ9H1L0 117 aa27.04■■□□□ 1.92
VEGFA-231ENST00000640499 ADAMTS9Q9P2N4 1935 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms