RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 TMPRSS6Q8IU80 811 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 RASGEF1AQ8N9B8 481 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 CYP2W1Q8TAV3 490 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 ADI1Q9BV57 179 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 XPO4Q9C0E2 1151 aaKnown RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 C3orf14Q9HBI5 128 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 SAYSD1Q9NPB0 183 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 SYBUQ9NX95 663 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 FBXW2Q9UKT8 454 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 ZNF214Q9UL59 606 aaPredicted RBP5.08□□□□□ -1.6
SCN1A-218ENST00000640036 SCML1Q9UN30 329 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 NWD2Q9ULI1 1742 aa5.08□□□□□ -1.6
SCN1A-218ENST00000640036 SMIM28A0A1B0GU29 152 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 KIF1CO43896 1103 aaKnown RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 UBXN7O94888 489 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 LDOC1O95751 146 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ECDO95905 644 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 NCF2P19878 526 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 CYP2F1P24903 491 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 EIF3BP55884 814 aaKnown RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 WDR5P61964 334 aaKnown RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SNTA1Q13424 505 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 CRTC3Q6UUV7 619 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 NUDCD3Q8IVD9 361 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 DEFB106AQ8N104 65 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ANKRD52Q8NB46 1076 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SRFBP1Q8NEF9 429 aaKnown RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SPATA20Q8TB22 786 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 KCTD13Q8WZ19 329 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ANKS1AQ92625 1134 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 GFM1Q96RP9 751 aaKnown RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 TPSD1Q9BZJ3 242 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SRMSQ9H3Y6 488 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ELOVL6Q9H5J4 265 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 OSGEPQ9NPF4 335 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ZNF112Q9UJU3 913 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 COLQQ9Y215 455 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SNX5Q9Y5X3 404 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 POLR2AP24928 1970 aaKnown RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 LILRB3O75022 631 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 MICAL2O94851 1124 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 CD2BP2O95400 341 aaKnown RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 F2P00734 622 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 RBP3P10745 1247 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 GNPDA1P46926 289 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 PLTPP55058 493 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 AP5B1Q2VPB7 878 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 INTS6LQ5JSJ4 861 aaKnown RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 FNBP1LQ5T0N5 605 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 VASH1Q7L8A9 365 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 FAM228AQ86W67 206 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ZBED8Q8IZ13 594 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 CLEC1AQ8NC01 280 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 COG1Q8WTW3 980 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ABTB1Q969K4 478 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 COQ3Q9NZJ6 369 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 WNT6Q9Y6F9 365 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SAC3D1A6NKF1 404 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 GRXCR1A8MXD5 290 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SGTAO43765 313 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 DEAF1O75398 565 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 CTSAP10619 480 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 S100GP29377 79 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 GUCY2FP51841 1108 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 GABPB1Q06547 395 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ARHGAP1Q07960 439 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 RIPPLY1Q0D2K3 151 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 TAF13Q15543 124 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 MBLAC2Q68D91 279 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ABHD15Q6UXT9 468 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 RALGPS2Q86X27 583 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SCUBE3Q8IX30 993 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 GALNT15Q8N3T1 639 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 OR6C4Q8NGE1 309 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 VPS33AQ96AX1 596 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 DEPDC7Q96QD5 511 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 THSD1Q9NS62 852 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ABCB8Q9NUT2 735 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ING3Q9NXR8 418 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 KCNK4Q9NYG8 393 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ZNF142P52746 1687 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 A0A087X0T9 212 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 CHURC1-FNTBB4DL54 471 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 DLX3O60479 287 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 GJA1P17302 382 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ATP4AP20648 1035 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SMTNL2Q2TAL5 461 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 HGSNATQ68CP4 663 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 TERB1Q8NA31 727 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SGSM3Q96HU1 749 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 OLFM3Q96PB7 478 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.07□□□□□ -1.6
SCN1A-218ENST00000640036 FAM153AQ9UHL3 310 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 LDB2O43679 373 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 ENTPD5O75356 428 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 LRCH4O75427 683 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SLC11A1P49279 550 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 RRADP55042 308 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 HSPA14Q0VDF9 509 aa5.07□□□□□ -1.6
SCN1A-218ENST00000640036 SLC9A5Q14940 896 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms