RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 PSMB9P28065 219 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 LIN52Q52LA3 116 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 PKN3Q6P5Z2 889 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 TERB1Q8NA31 727 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 CMASQ8NFW8 434 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-210ENST00000638567 STAG3L4Q8TBR4 150 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 LZICQ8WZA0 190 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 DDX1Q92499 740 aaKnown RBP16.82■□□□□ 0.28
SCARB2-210ENST00000638567 EBF2Q9HAK2 575 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 CNGB3Q9NQW8 809 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 EGFL7Q9UHF1 273 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 TSC22D4Q9Y3Q8 395 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 PCDHB7Q9Y5E2 793 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 GCATO75600 419 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 ALDH1A1P00352 501 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 SMIM10L2AP0DMW4 78 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 SMIM10L2BP0DMW5 78 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 PEX2P28328 305 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 HOXD10P28358 340 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 ICAM3P32942 547 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 GPD2P43304 727 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 FAM35AQ86V20 835 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 DSELQ8IZU8 1212 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 LGI2Q8N0V4 545 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 DCAKDQ8WVC6 231 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 UCMAQ8WVF2 138 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 GATA5Q9BWX5 397 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-210ENST00000638567 MTF2Q9Y483 593 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-210ENST00000638567 SLC15A5A6NIM6 579 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 WDR47O94967 919 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 VAV1P15498 845 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 MZF1P28698 734 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-210ENST00000638567 WNT3AP56704 352 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 ZC3H12BQ5HYM0 836 aaKnown RBP16.82■□□□□ 0.28
SCARB2-210ENST00000638567 GK5Q6ZS86 529 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 ZNF781Q8N8C0 355 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 NIPA2Q8N8Q9 360 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 AZIN2Q96A70 460 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 ROGDIQ9GZN7 287 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 ZNF395Q9H8N7 513 aaPredicted RBP16.82■□□□□ 0.28
SCARB2-210ENST00000638567 ETAA1Q9NY74 926 aa16.82■□□□□ 0.28
SCARB2-210ENST00000638567 DPYSL4O14531 572 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 HOXC6P09630 235 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 DEFA1P59665 94 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 DEFA3P59666 94 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 XIAPP98170 497 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 CSTF3Q12996 717 aaKnown RBP16.81■□□□□ 0.28
SCARB2-210ENST00000638567 SLC10A6Q3KNW5 377 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 ZIK1Q3SY52 487 aaPredicted RBP16.81■□□□□ 0.28
SCARB2-210ENST00000638567 IL27RAQ6UWB1 636 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 CATSPERZQ9NTU4 200 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 TRPM5Q9NZQ8 1165 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 SLC7A8Q9UHI5 535 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 SMIM28A0A1B0GU29 152 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 HS6ST1O60243 411 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 ALDH7A1P49419 539 aaKnown RBP16.81■□□□□ 0.28
SCARB2-210ENST00000638567 MAP1SQ66K74 1059 aaPredicted RBP16.81■□□□□ 0.28
SCARB2-210ENST00000638567 POTEHQ6S545 545 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 OTOP3Q7RTS5 596 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 MILR1Q7Z6M3 343 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 GPSM1Q86YR5 675 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 TMEM192Q8IY95 271 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 ZNF567Q8N184 647 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 LPPQ93052 612 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 HDAC10Q969S8 669 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 SMPD4Q9NXE4 827 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 MARCH2Q9P0N8 246 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 MSCO60682 206 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 KRT6AP02538 564 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 KRT6BP04259 564 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 MBL2P11226 248 aaPredicted RBP16.81■□□□□ 0.28
SCARB2-210ENST00000638567 GRIA1P42261 906 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 KRT6CP48668 564 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 LIMK2P53671 638 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 GRM3Q14832 879 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 EMC10Q5UCC4 262 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 METTL21CQ5VZV1 264 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 ZBTB46Q86UZ6 589 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 MYLPFQ96A32 169 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 MCRS1Q96EZ8 462 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 DTLQ9NZJ0 730 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 RCOR3Q9P2K3 495 aaPredicted RBP16.81■□□□□ 0.28
SCARB2-210ENST00000638567 CDH9Q9ULB4 789 aa16.81■□□□□ 0.28
SCARB2-210ENST00000638567 CXorf49A8MYA2 514 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-210ENST00000638567 TK2O00142 265 aa16.8■□□□□ 0.28
SCARB2-210ENST00000638567 SEC22BO75396 215 aa16.8■□□□□ 0.28
SCARB2-210ENST00000638567 CKMP06732 381 aa16.8■□□□□ 0.28
SCARB2-210ENST00000638567 HALP42357 657 aa16.8■□□□□ 0.28
SCARB2-210ENST00000638567 PTPN9P43378 593 aa16.8■□□□□ 0.28
SCARB2-210ENST00000638567 BFSP2Q13515 415 aa16.8■□□□□ 0.28
SCARB2-210ENST00000638567 ACBD5Q5T8D3 534 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-210ENST00000638567 DDX53Q86TM3 631 aaKnown RBP16.8■□□□□ 0.28
SCARB2-210ENST00000638567 TWNKQ96RR1 684 aa16.8■□□□□ 0.28
SCARB2-210ENST00000638567 SEMA3CQ99985 751 aa16.8■□□□□ 0.28
SCARB2-210ENST00000638567 MPP6Q9NZW5 540 aa16.8■□□□□ 0.28
SCARB2-210ENST00000638567 UBE3AQ05086 875 aa16.8■□□□□ 0.28
SCARB2-210ENST00000638567 MBTD1Q05BQ5 628 aa16.8■□□□□ 0.28
SCARB2-210ENST00000638567 CCDC92Q53HC0 331 aaPredicted RBP16.8■□□□□ 0.28
SCARB2-210ENST00000638567 FAM171A1Q5VUB5 890 aa16.8■□□□□ 0.28
SCARB2-210ENST00000638567 RAP1GAP2Q684P5 730 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms