RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 CADM2Q8N3J6 435 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 TSEN15Q8WW01 171 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 CNPY3Q9BT09 278 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 SPATA31A5Q5VU36 1347 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 SPATA31A7Q8IWB4 1347 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 NEDD8-MDP1E9PL57 170 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 CBX5P45973 191 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 SCNN1GP51170 649 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 TAS2R41P59536 307 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 MINDY4Q4G0A6 757 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 SLC2A14Q8TDB8 520 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 CCSER2Q9H7U1 834 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 MAGEB3O15480 346 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 GNALP38405 381 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 NRG1Q02297 640 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 HYAL2Q12891 473 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 AADACL2Q6P093 401 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 GCNT7Q6ZNI0 430 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 SAMD3Q8N6K7 520 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 PRRG3Q9BZD7 231 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 HMG20AQ9NP66 347 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 A8MUA0 341 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 RAMP2O60895 175 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 PGDP52209 483 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 SLAIN1Q8ND83 568 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 TKTL2Q9H0I9 626 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 EPB41L4BQ9H329 900 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 C8orf4Q9NR00 106 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 DMTF1Q9Y222 760 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 SPAG6O75602 509 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 DBTP11182 482 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 PDX1P52945 283 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 MPP3Q13368 585 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 MARC1Q5VT66 337 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 TAF2Q6P1X5 1199 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 TTC7BQ86TV6 843 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 MAB21L3Q8N8X9 362 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 COPS5Q92905 334 aa17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 GAS2L1Q99501 681 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-253ENST00000637927 ZNF839A8K0R7 811 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 TISP43B9A030 160 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 PIAS1O75925 651 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 IGSF6O95976 241 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 AP2S1P53680 142 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 SPIBQ01892 262 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 MYBPC2Q14324 1141 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 PFKFB4Q16877 469 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 ZZZ3Q8IYH5 903 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 VPS35Q96QK1 796 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 TBL1YQ9BQ87 522 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 DNTTP04053 509 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 NUDT17P0C025 328 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 USP41Q3LFD5 358 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 SULT1C3Q6IMI6 304 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 IZUMO2Q6UXV1 221 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 WDR49Q8IV35 697 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 ZNF248Q8NDW4 579 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 CAPN6Q9Y6Q1 641 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 CASZ1Q86V15 1759 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 C15orf38-AP3S2A0A0A6YYH1 394 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 DDX3YO15523 660 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 HOXA2O43364 376 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 PDK2Q15119 407 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 KCNA10Q16322 511 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 CLVS1Q8IUQ0 354 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 CFAP52Q8N1V2 620 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 OR4A15Q8NGL6 344 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 FAM81AQ8TBF8 368 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 KCNK1O00180 336 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 PIK3CGP48736 1102 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 RAD23AP54725 363 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 TOP3AQ13472 1001 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 ITGA9Q13797 1035 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 PCDH20Q8N6Y1 951 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 ZNF655Q8N720 491 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 DNAJC11Q9NVH1 559 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 RBMX2Q9Y388 322 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 A0A0A6YYK5 440 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 VAPBO95292 243 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 STATHP02808 62 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 PTPN11Q06124 597 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 RASA2Q15283 850 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 ZNF571Q7Z3V5 609 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 GALNT5Q7Z7M9 940 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 KCNMB4Q86W47 210 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 SYNPOQ8N3V7 929 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 CLHC1Q8NHS4 586 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 REPS1Q96D71 796 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 MCMBPQ9BTE3 642 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 KLHL4Q9C0H6 718 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 CDC42EP4Q9H3Q1 356 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 ABCB10Q9NRK6 738 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 ADPRHL2Q9NX46 363 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 MRPS23Q9Y3D9 190 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 HES2Q9Y543 173 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 CDC42BPAQ5VT25 1732 aa17.15■□□□□ 0.34
CACNA1A-253ENST00000637927 ARL5CA6NH57 179 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 NCAM2O15394 837 aa17.14■□□□□ 0.33
CACNA1A-253ENST00000637927 FBXO21O94952 628 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms