RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	CP	P00450	1065 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	AGT	P01019	485 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	SERPINF2	P08697	491 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	CISD3	P0C7P0	127 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	ARSA	P15289	507 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	CR2	P20023	1033 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	PHB	P35232	272 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	NUMB	P49757	651 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	WNT3A	P56704	352 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	CDH17	Q12864	832 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	FUT11	Q495W5	492 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	PRPF38B	Q5VTL8	546 aa	Known RBP	11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	ARMC3	Q5W041	872 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	RANBP10	Q6VN20	620 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	C3orf62	Q6ZUJ4	267 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	CROCCP2	Q86T23	111 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	CCNJL	Q8IV13	435 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	IGDCC3	Q8IVU1	814 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	AHI1	Q8N157	1196 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	CPA6	Q8N4T0	437 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	NAT16	Q8N8M0	369 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	DNAAF3	Q8N9W5	541 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	ATP11C	Q8NB49	1132 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	IPMK	Q8NFU5	416 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	OR52K1	Q8NGK4	314 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	WFIKKN2	Q8TEU8	576 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	TTC17	Q96AE7	1141 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	ISG20	Q96AZ6	181 aa	Known RBP	11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	LRCH3	Q96II8	777 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	ZFYVE19	Q96K21	471 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	MRGPRX2	Q96LB1	330 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	FAM161B	Q96MY7	647 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	NUDCD1	Q96RS6	583 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	EBNA1BP2	Q99848	306 aa	Known RBP	11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	CCDC77	Q9BR77	488 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	NAT9	Q9BTE0	207 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	PLA2G2F	Q9BZM2	168 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	EBF3	Q9H4W6	596 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	ECT2	Q9H8V3	914 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	ARNT2	Q9HBZ2	717 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	LRRC4C	Q9HCJ2	640 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	SCUBE2	Q9NQ36	999 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	LHX3	Q9UBR4	397 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	SLC25A13	Q9UJS0	675 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	SLC27A6	Q9Y2P4	619 aa		11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	USP15	Q9Y4E8	981 aa	Predicted RBP	11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.93	□□□□□ -0.5
CLN6-223	ENST00000637823	MYLK	Q15746	1914 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	LAMA3	Q16787	3333 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	AGPS	O00116	658 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	USP12	O75317	370 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	SPAG6	O75602	509 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	MT-CO1	P00395	513 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	EPO	P01588	193 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	POLR2E	P19388	210 aa	Known RBP	11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	MGAT1	P26572	445 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	CSNK1D	P48730	415 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	DGKG	P49619	791 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	SERPINH1	P50454	418 aa	Known RBP	11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	VASP	P50552	380 aa	Predicted RBP	11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	SCNN1B	P51168	640 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	SESN2	P58004	480 aa	Predicted RBP	11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	GPX6	P59796	221 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	RHOA	P61586	193 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	FAM193A	P78312	1265 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	ECT2L	Q008S8	904 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	IFFO1	Q0D2I5	559 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	RUNX3	Q13761	415 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	STAT4	Q14765	748 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	MBLAC2	Q68D91	279 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	DENND5A	Q6IQ26	1287 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	GPR153	Q6NV75	609 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	PARM1	Q6UWI2	310 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	SRL	Q86TD4	932 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	ADIPOR2	Q86V24	386 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	ETFBKMT	Q8IXQ9	262 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	AGGF1	Q8N302	714 aa	eCLIP	11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	STAMBPL1	Q96FJ0	436 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	FEM1C	Q96JP0	617 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	KXD1	Q9BQD3	176 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	FICD	Q9BVA6	458 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	TMEM109	Q9BVC6	243 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	TRMT61B	Q9BVS5	477 aa	Known RBP	11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	FSD1L	Q9BXM9	530 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	IL22	Q9GZX6	179 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	VPS37B	Q9H9H4	285 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	NOD2	Q9HC29	1040 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	HPS4	Q9NQG7	708 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	CHMP2B	Q9UQN3	213 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	HS3ST2	Q9Y278	367 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	MAD1L1	Q9Y6D9	718 aa		11.92	□□□□□ -0.5
CLN6-223	ENST00000637823	MYO10	Q9HD67	2058 aa		11.91	□□□□□ -0.5
CLN6-223	ENST00000637823	LOC285095	A0A1B0GVY8	99 aa		11.91	□□□□□ -0.5
CLN6-223	ENST00000637823	TTC24	A2A3L6	582 aa	Predicted RBP	11.91	□□□□□ -0.5
CLN6-223	ENST00000637823	ANHX	E9PGG2	379 aa		11.91	□□□□□ -0.5
CLN6-223	ENST00000637823	SMAD6	O43541	496 aa	Known RBP	11.91	□□□□□ -0.5

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