RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 M0QYT0 321 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 M0QYV0 167 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 MTSS1O43312 755 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 PAEPP09466 180 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 ITGB7P26010 798 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 L1CAMP32004 1257 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 PITX1P78337 314 aaPredicted RBP18.49■□□□□ 0.55
CLN6-212ENST00000636020 KRT83P78385 493 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 CUL4AQ13619 759 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 DPY19L3Q6ZPD9 716 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 ATCAYQ86WG3 371 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 CCNJLQ8IV13 435 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 FSTL5Q8N475 847 aaPredicted RBP18.49■□□□□ 0.55
CLN6-212ENST00000636020 OR6C4Q8NGE1 309 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 SCG3Q8WXD2 468 aaKnown RBP18.49■□□□□ 0.55
CLN6-212ENST00000636020 CENPTQ96BT3 561 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 CATSPER2Q96P56 530 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 EPAS1Q99814 870 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 ZSCAN16Q9H4T2 348 aaPredicted RBP18.49■□□□□ 0.55
CLN6-212ENST00000636020 VPS51Q9UID3 782 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 DOLKQ9UPQ8 538 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 MTMR6Q9Y217 621 aa18.49■□□□□ 0.55
CLN6-212ENST00000636020 STMND1H3BQB6 276 aa18.48■□□□□ 0.55
CLN6-212ENST00000636020 SART1O43290 800 aaKnown RBP18.48■□□□□ 0.55
CLN6-212ENST00000636020 RPL34P49207 117 aaKnown RBP18.48■□□□□ 0.55
CLN6-212ENST00000636020 ATP1A2P50993 1020 aa18.48■□□□□ 0.55
CLN6-212ENST00000636020 CLCN6P51797 869 aa18.48■□□□□ 0.55
CLN6-212ENST00000636020 YPEL5P62699 121 aa18.48■□□□□ 0.55
CLN6-212ENST00000636020 PPARDQ03181 441 aa18.48■□□□□ 0.55
CLN6-212ENST00000636020 ADAM9Q13443 819 aa18.48■□□□□ 0.55
CLN6-212ENST00000636020 ELOCQ15369 112 aa18.48■□□□□ 0.55
CLN6-212ENST00000636020 TMEM164Q5U3C3 297 aa18.48■□□□□ 0.55
CLN6-212ENST00000636020 SLITRK4Q8IW52 837 aa18.48■□□□□ 0.55
CLN6-212ENST00000636020 MUC3BQ9H195 1237 aa18.48■□□□□ 0.55
CLN6-212ENST00000636020 TNKS2Q9H2K2 1166 aa18.48■□□□□ 0.55
CLN6-212ENST00000636020 GPR34Q9UPC5 381 aa18.48■□□□□ 0.55
CLN6-212ENST00000636020 COQ4Q9Y3A0 265 aa18.48■□□□□ 0.55
CLN6-212ENST00000636020 TSPAN6O43657 245 aa18.47■□□□□ 0.55
CLN6-212ENST00000636020 CLDN11O75508 207 aa18.47■□□□□ 0.55
CLN6-212ENST00000636020 ZNF821O75541 412 aaPredicted RBP18.47■□□□□ 0.55
CLN6-212ENST00000636020 KRT38O76015 456 aa18.47■□□□□ 0.55
CLN6-212ENST00000636020 RPL13P26373 211 aaKnown RBP18.47■□□□□ 0.55
CLN6-212ENST00000636020 AUHQ13825 339 aaKnown RBP18.47■□□□□ 0.55
CLN6-212ENST00000636020 C22orf39Q6P5X5 142 aa18.47■□□□□ 0.55
CLN6-212ENST00000636020 MACC1Q6ZN28 852 aa18.47■□□□□ 0.55
CLN6-212ENST00000636020 TMPRSS9Q7Z410 1059 aa18.47■□□□□ 0.55
CLN6-212ENST00000636020 Q8N9G6 341 aaPredicted RBP18.47■□□□□ 0.55
CLN6-212ENST00000636020 PAGE5Q96GU1 130 aa18.47■□□□□ 0.55
CLN6-212ENST00000636020 C2orf49Q9BVC5 232 aaPredicted RBP18.47■□□□□ 0.55
CLN6-212ENST00000636020 TRIM62Q9BVG3 475 aa18.47■□□□□ 0.55
CLN6-212ENST00000636020 SERTAD1Q9UHV2 236 aa18.47■□□□□ 0.55
CLN6-212ENST00000636020 APPL1Q9UKG1 709 aa18.47■□□□□ 0.55
CLN6-212ENST00000636020 VANGL2Q9ULK5 521 aa18.47■□□□□ 0.55
CLN6-212ENST00000636020 RNF215Q9Y6U7 377 aa18.47■□□□□ 0.55
CLN6-212ENST00000636020 C2CD3Q4AC94 2353 aa18.47■□□□□ 0.55
CLN6-212ENST00000636020 STX10O60499 249 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 AGFG2O95081 481 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 ALPIP09923 528 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 SLC2A3P11169 496 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 LIFP15018 202 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 BRD2P25440 801 aaKnown RBP18.46■□□□□ 0.55
CLN6-212ENST00000636020 IGFALSP35858 605 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 EIF4A3P38919 411 aaKnown RBP18.46■□□□□ 0.55
CLN6-212ENST00000636020 RECQLP46063 649 aaPredicted RBP18.46■□□□□ 0.55
CLN6-212ENST00000636020 ARSDP51689 593 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 C16orf72Q14CZ0 275 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 STILQ15468 1287 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 CBWD6Q4V339 395 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 CBWD3Q5JTY5 395 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 CBWD5Q5RIA9 395 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 TMEM270Q6UE05 265 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 LINGO4Q6UY18 593 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 PARS2Q7L3T8 475 aaKnown RBP18.46■□□□□ 0.55
CLN6-212ENST00000636020 CEP57L1Q8IYX8 460 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 GPBAR1Q8TDU6 330 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 ABHD17AQ96GS6 310 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 CDH19Q9H159 772 aa18.46■□□□□ 0.55
CLN6-212ENST00000636020 RNF225M0QZC1 329 aaPredicted RBP18.45■□□□□ 0.54
CLN6-212ENST00000636020 ENDOD1O94919 500 aa18.45■□□□□ 0.54
CLN6-212ENST00000636020 YEATS4O95619 227 aa18.45■□□□□ 0.54
CLN6-212ENST00000636020 CCL4P13236 92 aa18.45■□□□□ 0.54
CLN6-212ENST00000636020 BLKP51451 505 aa18.45■□□□□ 0.54
CLN6-212ENST00000636020 HK3P52790 923 aa18.45■□□□□ 0.54
CLN6-212ENST00000636020 CDH4P55283 916 aa18.45■□□□□ 0.54
CLN6-212ENST00000636020 IL22RA1Q8N6P7 574 aa18.45■□□□□ 0.54
CLN6-212ENST00000636020 GPR156Q8NFN8 814 aa18.45■□□□□ 0.54
CLN6-212ENST00000636020 EDEM3Q9BZQ6 932 aa18.45■□□□□ 0.54
CLN6-212ENST00000636020 POPDC2Q9HBU9 364 aa18.45■□□□□ 0.54
CLN6-212ENST00000636020 ST7Q9NRC1 585 aa18.45■□□□□ 0.54
CLN6-212ENST00000636020 FAM13BQ9NYF5 915 aa18.45■□□□□ 0.54
CLN6-212ENST00000636020 GGT7Q9UJ14 662 aa18.45■□□□□ 0.54
CLN6-212ENST00000636020 ZNF891A8MT65 544 aaPredicted RBP18.44■□□□□ 0.54
CLN6-212ENST00000636020 ACTN4O43707 911 aaKnown RBP18.44■□□□□ 0.54
CLN6-212ENST00000636020 CALCAP01258 141 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 GLB1P16278 677 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 TBXAS1P24557 533 aaPredicted RBP18.44■□□□□ 0.54
CLN6-212ENST00000636020 CCR1P32246 355 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 ABL2P42684 1182 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 KLRB1Q12918 225 aa18.44■□□□□ 0.54
CLN6-212ENST00000636020 TCEA2Q15560 299 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms