RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ATAD5Q96QE3 1844 aa2.75□□□□□ -1.97
SMARCB1-208ENST00000634926 UTYO14607 1347 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 IL16Q14005 1332 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 FAM205AQ6ZU69 1335 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 A0A0G2JMZ2 1700 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 MYMKA6NI61 221 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 B4E171 279 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 E7EVH7 732 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 AGPSO00116 658 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 PPP6R2O75170 966 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 RPP40O75818 363 aaKnown RBP2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 BAIAP3O94812 1187 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 LARGE1O95461 756 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 TTLL1O95922 423 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 TFRCP02786 760 aaKnown RBP2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 LDHCP07864 332 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 CNPP09543 421 aaKnown RBP2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 CD19P15391 556 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 CAPN3P20807 821 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 ADORA2AP29274 412 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 NTSR1P30989 418 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 AKT1P31749 480 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 HTR7P34969 479 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 KRT9P35527 623 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 TSPAN7P41732 249 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 LIFRP42702 1097 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 HTR6P50406 440 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 TUBP50607 506 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 TIRAPP58753 221 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 GCKRQ14397 625 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 RPS6KA2Q15349 733 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 SMAD1Q15797 465 aaKnown RBP2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 BTBD16Q32M84 506 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 FAM180BQ6P0A1 224 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 MSANTD2Q6P1R3 559 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 DSTYKQ6XUX3 929 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 RRAGAQ7L523 313 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 G2E3Q7L622 706 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 DTX2Q86UW9 622 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 TRABD2AQ86V40 505 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 HEATR4Q86WZ0 1026 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 APOBEC3FQ8IUX4 373 aaKnown RBP2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 CNGA4Q8IV77 575 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 IZUMO1Q8IYV9 350 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 GALNT16Q8N428 558 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 NANOGP1Q8N7R0 232 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 NSMCE1Q8WV22 266 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 TMEM171Q8WVE6 324 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 OSCP1Q8WVF1 389 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 ATRIPQ8WXE1 791 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 C3orf49Q96BT1 292 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 FAM136AQ96C01 138 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 RSPRY1Q96DX4 576 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 KAZALD1Q96I82 304 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 ZNF333Q96JL9 665 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 CLMNQ96JQ2 1002 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 ZBTB45Q96K62 511 aaPredicted RBP2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 C5orf34Q96MH7 638 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 COG8Q96MW5 612 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 PAAF1Q9BRP4 392 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 VN1R3Q9BXE9 311 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 BRD8Q9H0E9 1235 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 NOD2Q9HC29 1040 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 TRIM36Q9NQ86 728 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 SERTAD4Q9NUC0 356 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 SERTAD3Q9UJW9 196 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 FBXO2Q9UK22 296 aaPredicted RBP2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 CNTN6Q9UQ52 1028 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 SLC27A6Q9Y2P4 619 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 DERAQ9Y315 318 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 PCDHAC2Q9Y5I4 1007 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 SNX14Q9Y5W7 946 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 LTBP2Q14767 1821 aa2.74□□□□□ -1.97
SMARCB1-208ENST00000634926 VPS13AQ96RL7 3174 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 KIF16BQ96L93 1317 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 FANCIQ9NVI1 1328 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 WDR87Q6ZQQ6 2873 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 ZNF236Q9UL36 1845 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 LY6G6EA0A0G2JKS1 128 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 GXYLT2A0PJZ3 443 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 PI4KAP2A4QPH2 592 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 SAC3D1A6NKF1 404 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 F5H0A9 414 aaPredicted RBP2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 UBE2Q2LH0YL09 131 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 SNAP23O00161 211 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 SOCS2O14508 198 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 BCAR3O75815 825 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 WDR47O94967 919 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 DDX58O95786 925 aaKnown RBP2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 CER1O95813 267 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 HSP90AA1P07900 732 aaKnown RBP2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 RXRAP19793 462 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 SERPINA4P29622 427 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 NR1H2P55055 460 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 SREBF2Q12772 1141 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 SLC12A1Q13621 1099 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 ANKRD1Q15327 319 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 DLGAP5Q15398 846 aa2.73□□□□□ -1.97
SMARCB1-208ENST00000634926 TBRG1Q3YBR2 411 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms