RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-223ENST00000631247 FAM174AQ8TBP5 190 aa10.56□□□□□ -0.72
UBE3A-223ENST00000631247 HEPHQ9BQS7 1158 aa10.56□□□□□ -0.72
UBE3A-223ENST00000631247 C11orf70Q9BRQ4 267 aa10.56□□□□□ -0.72
UBE3A-223ENST00000631247 NAA15Q9BXJ9 866 aaKnown RBP10.56□□□□□ -0.72
UBE3A-223ENST00000631247 VPS16Q9H269 839 aa10.56□□□□□ -0.72
UBE3A-223ENST00000631247 FAM207AQ9NSI2 230 aaPredicted RBP10.56□□□□□ -0.72
UBE3A-223ENST00000631247 SAMSN1Q9NSI8 373 aaKnown RBP10.56□□□□□ -0.72
UBE3A-223ENST00000631247 DNAJC28Q9NX36 388 aa10.56□□□□□ -0.72
UBE3A-223ENST00000631247 PPARGC1AQ9UBK2 798 aaKnown RBP10.56□□□□□ -0.72
UBE3A-223ENST00000631247 IPO11Q9UI26 975 aaKnown RBP10.56□□□□□ -0.72
UBE3A-223ENST00000631247 FCF1Q9Y324 198 aaKnown RBP10.56□□□□□ -0.72
UBE3A-223ENST00000631247 MYLKQ15746 1914 aa10.56□□□□□ -0.72
UBE3A-223ENST00000631247 URB1O60287 2271 aaKnown RBP10.55□□□□□ -0.72
UBE3A-223ENST00000631247 TRIM38O00635 465 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 RAMP2O60895 175 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 PIAS2O75928 621 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 L1CAMP32004 1257 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 SLC19A1P41440 591 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 NSFP46459 744 aaKnown RBP10.55□□□□□ -0.72
UBE3A-223ENST00000631247 MAPKAPK2P49137 400 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 POLR2FP61218 127 aaKnown RBP10.55□□□□□ -0.72
UBE3A-223ENST00000631247 HNRNPKP61978 463 aaKnown RBP eCLIP10.55□□□□□ -0.72
UBE3A-223ENST00000631247 ARF5P84085 180 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 E2F1Q01094 437 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 INSM1Q01101 510 aaPredicted RBP10.55□□□□□ -0.72
UBE3A-223ENST00000631247 CDR2Q01850 454 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 SGCGQ13326 291 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 TMEM259Q4ZIN3 620 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 CT47A1Q5JQC4 288 aaPredicted RBP10.55□□□□□ -0.72
UBE3A-223ENST00000631247 TRNP1Q6NT89 227 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 KYAT3Q6YP21 454 aaKnown RBP10.55□□□□□ -0.72
UBE3A-223ENST00000631247 TRIM72Q6ZMU5 477 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 Q6ZSR6 202 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 PARS2Q7L3T8 475 aaKnown RBP10.55□□□□□ -0.72
UBE3A-223ENST00000631247 ARCQ7LC44 396 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 ABI3BPQ7Z7G0 1075 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 PHLDB2Q86SQ0 1253 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 ZSCAN30Q86W11 494 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 DCP2Q8IU60 420 aaKnown RBP10.55□□□□□ -0.72
UBE3A-223ENST00000631247 ANKRD20A12PQ8NF67 263 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 OR6K2Q8NGY2 324 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 SLC20A1Q8WUM9 679 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 RXFP2Q8WXD0 754 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 FEM1CQ96JP0 617 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 SLC17A9Q9BYT1 436 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 NRSN2Q9GZP1 204 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 NLRC4Q9NPP4 1024 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 SEPT11Q9NVA2 429 aaKnown RBP10.55□□□□□ -0.72
UBE3A-223ENST00000631247 UCKL1Q9NWZ5 548 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 HECAQ9UBI9 543 aaPredicted RBP10.55□□□□□ -0.72
UBE3A-223ENST00000631247 OR12D3Q9UGF7 316 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 DNAI1Q9UI46 699 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 TMEM59LQ9UK28 342 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 ZFR2Q9UPR6 939 aaKnown RBP10.55□□□□□ -0.72
UBE3A-223ENST00000631247 WASF2Q9Y6W5 498 aa10.55□□□□□ -0.72
UBE3A-223ENST00000631247 TDRD6O60522 2096 aaKnown RBP10.54□□□□□ -0.72
UBE3A-223ENST00000631247 ANKRD62A6NC57 917 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 KRIT1O00522 736 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 FPGTO14772 594 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 ZMPSTE24O75844 475 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 PAK4O96013 591 aaPredicted RBP10.54□□□□□ -0.72
UBE3A-223ENST00000631247 RHOQP17081 205 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 DESP17661 470 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 MMP8P22894 467 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 ACVRL1P37023 503 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 RABIFP47224 123 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 DUSP3P51452 185 aaPredicted RBP10.54□□□□□ -0.72
UBE3A-223ENST00000631247 C15orf59Q2T9L4 293 aaPredicted RBP10.54□□□□□ -0.72
UBE3A-223ENST00000631247 ZNF542PQ5EBM4 170 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 DPY19L2P1Q6NXN4 242 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 KDM7AQ6ZMT4 941 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 STRADAQ7RTN6 431 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 PARGQ86W56 976 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 SLC22A18ASQ8N1D0 253 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 SLC25A45Q8N413 288 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 SLC30A5Q8TAD4 765 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 FAM172AQ8WUF8 416 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 RFFLQ8WZ73 363 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 RAB7BQ96AH8 199 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 TBC1D31Q96DN5 1066 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 ARHGEF26Q96DR7 871 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 IFT43Q96FT9 208 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 DUSP23Q9BVJ7 150 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 SELENOOQ9BVL4 669 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 OSBPL1AQ9BXW6 950 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 ABCG4Q9H172 646 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 GANQ9H2C0 597 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 NLGN3Q9NZ94 848 aa10.54□□□□□ -0.72
UBE3A-223ENST00000631247 NOCTQ9UK39 431 aaKnown RBP10.54□□□□□ -0.72
UBE3A-223ENST00000631247 TRPM6Q9BX84 2022 aa10.53□□□□□ -0.72
UBE3A-223ENST00000631247 ZSCAN5CA6NGD5 496 aaPredicted RBP10.53□□□□□ -0.72
UBE3A-223ENST00000631247 RNF103O00237 685 aa10.53□□□□□ -0.72
UBE3A-223ENST00000631247 LCE2BO14633 110 aa10.53□□□□□ -0.72
UBE3A-223ENST00000631247 TSPAN6O43657 245 aa10.53□□□□□ -0.72
UBE3A-223ENST00000631247 AP1G1O43747 822 aa10.53□□□□□ -0.72
UBE3A-223ENST00000631247 BRINP1O60477 761 aa10.53□□□□□ -0.72
UBE3A-223ENST00000631247 IGSF6O95976 241 aa10.53□□□□□ -0.72
UBE3A-223ENST00000631247 UGT2B4P06133 528 aa10.53□□□□□ -0.72
UBE3A-223ENST00000631247 PLEKP08567 350 aaPredicted RBP10.53□□□□□ -0.72
UBE3A-223ENST00000631247 KRT3P12035 628 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms