RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 ANKRD62A6NC57 917 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 CCP110O43303 1012 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 SDC3O75056 442 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 GYPCP04921 128 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 CCDC172P0C7W6 258 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 ADRB3P13945 408 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 HNRNPA2B1P22626 353 aaKnown RBP16.72■□□□□ 0.27
LINC00628-201ENST00000628516 ITGB7P26010 798 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 L1CAMP32004 1257 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 GEMIN4P57678 1058 aaKnown RBP16.72■□□□□ 0.27
LINC00628-201ENST00000628516 POLD3Q15054 466 aaPredicted RBP16.72■□□□□ 0.27
LINC00628-201ENST00000628516 SMAD1Q15797 465 aaKnown RBP16.72■□□□□ 0.27
LINC00628-201ENST00000628516 ASIC2Q16515 512 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 E4F1Q66K89 784 aaPredicted RBP16.72■□□□□ 0.27
LINC00628-201ENST00000628516 SPECC1LQ69YQ0 1117 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 LEKR1Q6ZMV7 388 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 PYROXD2Q8N2H3 581 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 ISG20Q96AZ6 181 aaKnown RBP16.72■□□□□ 0.27
LINC00628-201ENST00000628516 IQCDQ96DY2 449 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 MCEEQ96PE7 176 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 CAPN11Q9UMQ6 739 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 NEU3Q9UQ49 428 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 PCDHGA1Q9Y5H4 931 aa16.72■□□□□ 0.27
LINC00628-201ENST00000628516 GOLGA4Q13439 2230 aaKnown RBP16.72■□□□□ 0.27
LINC00628-201ENST00000628516 ZFYVE26Q68DK2 2539 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 PKD1L2Q7Z442 2459 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 COL5A1P20908 1838 aaPredicted RBP16.71■□□□□ 0.27
LINC00628-201ENST00000628516 TCRBV5S1A1TA0A578 114 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 RFPL3O75679 317 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 GKP32189 559 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 ZNF75DP51815 510 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 ZNF143P52747 638 aaPredicted RBP16.71■□□□□ 0.27
LINC00628-201ENST00000628516 CLDN2P57739 230 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 RPL7AP62424 266 aaKnown RBP16.71■□□□□ 0.27
LINC00628-201ENST00000628516 MAPK8IP2Q13387 824 aaPredicted RBP16.71■□□□□ 0.27
LINC00628-201ENST00000628516 EFHC2Q5JST6 749 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 DCUN1D2Q6PH85 259 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 PARS2Q7L3T8 475 aaKnown RBP16.71■□□□□ 0.27
LINC00628-201ENST00000628516 KANSL1Q7Z3B3 1105 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 IRF2BP2Q7Z5L9 587 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 PLPP6Q8IY26 295 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 OR6K2Q8NGY2 324 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 FEM1CQ96JP0 617 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 CALN1Q9BXU9 219 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 LUC7L2Q9Y383 392 aaKnown RBP16.71■□□□□ 0.27
LINC00628-201ENST00000628516 FADS3Q9Y5Q0 445 aa16.71■□□□□ 0.27
LINC00628-201ENST00000628516 DSPP15924 2871 aaKnown RBP16.7■□□□□ 0.26
LINC00628-201ENST00000628516 KDELR3O43731 214 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 CREB3O43889 395 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 C1SP09871 688 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 TNFAIP3P21580 790 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 EPHB2P29323 1055 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 CASP14P31944 242 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 ACADVLP49748 655 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 SNRPD1P62314 119 aaKnown RBP16.7■□□□□ 0.26
LINC00628-201ENST00000628516 RPS21P63220 83 aaKnown RBP16.7■□□□□ 0.26
LINC00628-201ENST00000628516 ZBED6P86452 979 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 TMEM259Q4ZIN3 620 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 ACAD10Q6JQN1 1059 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 KIAA1161Q6NSJ0 714 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 TMC6Q7Z403 805 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 TMPRSS12Q86WS5 348 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 MCOLN2Q8IZK6 566 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 RTL3Q8N8U3 475 aaKnown RBP16.7■□□□□ 0.26
LINC00628-201ENST00000628516 OR13H1Q8NG92 308 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 OR2AP1Q8NGE2 309 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 SLC17A9Q9BYT1 436 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 KLHL11Q9NVR0 708 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 AIPL1Q9NZN9 384 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 ANKRD11Q6UB99 2663 aaPredicted RBP16.7■□□□□ 0.26
LINC00628-201ENST00000628516 CELSR3Q9NYQ7 3312 aa16.7■□□□□ 0.26
LINC00628-201ENST00000628516 TRABD2BA6NFA1 517 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 C16orf96A6NNT2 1141 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 TMCO5BA8MYB1 307 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 KRIT1O00522 736 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 BUB1O43683 1085 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 AP1G1O43747 822 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 PAK4O96013 591 aaPredicted RBP16.69■□□□□ 0.26
LINC00628-201ENST00000628516 GSRP00390 522 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 CDK4P11802 303 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 SKILP12757 684 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 DESP17661 470 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 TRIM14Q14142 442 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 ZNF805Q5CZA5 627 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 PPP1R15BQ5SWA1 713 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 GCNT7Q6ZNI0 430 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 PTAR1Q7Z6K3 402 aaPredicted RBP16.69■□□□□ 0.26
LINC00628-201ENST00000628516 TSC1Q92574 1164 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 LRIG1Q96JA1 1093 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 EPAS1Q99814 870 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 CNPY3Q9BT09 278 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 TAS2R14Q9NYV8 317 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 FZD10Q9ULW2 581 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 HS3ST3A1Q9Y663 406 aa16.69■□□□□ 0.26
LINC00628-201ENST00000628516 CHD5Q8TDI0 1954 aa16.68■□□□□ 0.26
LINC00628-201ENST00000628516 ZSCAN5CA6NGD5 496 aaPredicted RBP16.68■□□□□ 0.26
LINC00628-201ENST00000628516 A6NNZ2 444 aa16.68■□□□□ 0.26
LINC00628-201ENST00000628516 NEMP1O14524 444 aa16.68■□□□□ 0.26
LINC00628-201ENST00000628516 TMCC1O94876 653 aa16.68■□□□□ 0.26
LINC00628-201ENST00000628516 POP4O95707 220 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms