RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 MAP2P11137 1827 aaKnown RBP12.94□□□□□ -0.34
SCN8A-209ENST00000627620 SGTAO43765 313 aa12.94□□□□□ -0.34
SCN8A-209ENST00000627620 NTRK1P04629 796 aa12.94□□□□□ -0.34
SCN8A-209ENST00000627620 GPR1P46091 355 aa12.94□□□□□ -0.34
SCN8A-209ENST00000627620 CRYBB1P53674 252 aaPredicted RBP12.94□□□□□ -0.34
SCN8A-209ENST00000627620 PRKAG1P54619 331 aa12.94□□□□□ -0.34
SCN8A-209ENST00000627620 AUHQ13825 339 aaKnown RBP12.94□□□□□ -0.34
SCN8A-209ENST00000627620 SDHAF4Q5VUM1 108 aa12.94□□□□□ -0.34
SCN8A-209ENST00000627620 HEATR4Q86WZ0 1026 aa12.94□□□□□ -0.34
SCN8A-209ENST00000627620 KRT73Q86Y46 540 aa12.94□□□□□ -0.34
SCN8A-209ENST00000627620 LRRC49Q8IUZ0 686 aa12.94□□□□□ -0.34
SCN8A-209ENST00000627620 LRRN4Q8WUT4 740 aa12.94□□□□□ -0.34
SCN8A-209ENST00000627620 SPRTNQ9H040 489 aaPredicted RBP12.94□□□□□ -0.34
SCN8A-209ENST00000627620 ATAD3AQ9NVI7 634 aa12.94□□□□□ -0.34
SCN8A-209ENST00000627620 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.94□□□□□ -0.34
SCN8A-209ENST00000627620 TMEM216Q9P0N5 145 aa12.94□□□□□ -0.34
SCN8A-209ENST00000627620 TMCO1Q9UM00 188 aa12.94□□□□□ -0.34
SCN8A-209ENST00000627620 LRCH1Q9Y2L9 728 aa12.94□□□□□ -0.34
SCN8A-209ENST00000627620 ITGB5P18084 799 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 TFEBP19484 476 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 POLD2P49005 469 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 RPL7AP62424 266 aaKnown RBP12.93□□□□□ -0.34
SCN8A-209ENST00000627620 USP41Q3LFD5 358 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 CES5AQ6NT32 575 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 POLNQ7Z5Q5 900 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 TTC7BQ86TV6 843 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 COLGALT2Q8IYK4 626 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 C12orf29Q8N999 325 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 RNPEPQ9H4A4 650 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 hCG_1818297A0A087WSY0 165 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 BTNL10A8MVZ5 291 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 GRIA4P48058 902 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 DGKZQ13574 1117 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 ZACNQ401N2 412 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 TRIQKQ629K1 86 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 CLVS1Q8IUQ0 354 aaPredicted RBP12.93□□□□□ -0.34
SCN8A-209ENST00000627620 STK32AQ8WU08 396 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 PYDC1Q8WXC3 89 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 COL26A1Q96A83 441 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 LGMNQ99538 433 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 MRPS23Q9Y3D9 190 aaKnown RBP12.93□□□□□ -0.34
SCN8A-209ENST00000627620 COL3A1P02461 1466 aaPredicted RBP12.93□□□□□ -0.34
SCN8A-209ENST00000627620 C1orf232A0A0U1RR37 186 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 CLDN5O00501 218 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 SLURP2P0DP57 97 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 CXCR2P25025 360 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 CREMQ03060 361 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 UGCGQ16739 394 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 PDZK1Q5T2W1 519 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 PRELID2Q8N945 189 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 TRAPPC9Q96Q05 1148 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 HSD17B14Q9BPX1 270 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 DCUN1D5Q9BTE7 237 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 BCLAF3A2AJT9 711 aaKnown RBP12.93□□□□□ -0.34
SCN8A-209ENST00000627620 FFAR3O14843 346 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 KPNA5O15131 536 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 GPR42O15529 346 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 SPATA31C1P0DKV0 1188 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 IGFBP4P22692 258 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 TNFRSF8P28908 595 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 PTPRNQ16849 979 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 GJC2Q5T442 439 aaPredicted RBP12.93□□□□□ -0.34
SCN8A-209ENST00000627620 CDC73Q6P1J9 531 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 TMEM199Q8N511 208 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 BAP1Q92560 729 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 ART4Q93070 314 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 PTCH2Q9Y6C5 1203 aa12.93□□□□□ -0.34
SCN8A-209ENST00000627620 TRIM43BA6NCK2 446 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 YDJCA8MPS7 323 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 CENPXA8MT69 81 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 MLYCDO95822 493 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 TSPAN19P0C672 248 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 JAK1P23458 1154 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 TLX1P31314 330 aaPredicted RBP12.92□□□□□ -0.34
SCN8A-209ENST00000627620 MRPS5P82675 430 aaKnown RBP12.92□□□□□ -0.34
SCN8A-209ENST00000627620 C11orf88Q6PI97 169 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 DCLRE1AQ6PJP8 1040 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 SERPINA13PQ6UXR4 307 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 BBS12Q6ZW61 710 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 ADHFE1Q8IWW8 467 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 RGL4Q8IZJ4 473 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 KCTD4Q8WVF5 259 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 DLG3Q92796 817 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 CEP44Q9C0F1 390 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 PSME2Q9UL46 239 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 SLC12A4Q9UP95 1085 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 PLSCR1O15162 318 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 TSC22D2O75157 780 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 RECQL5O94762 991 aaPredicted RBP12.92□□□□□ -0.34
SCN8A-209ENST00000627620 OR6A2O95222 327 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 CTNNB1P35222 781 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 GRM5P41594 1212 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 MARSP56192 900 aaKnown RBP12.92□□□□□ -0.34
SCN8A-209ENST00000627620 RAB10P61026 200 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 MAXP61244 160 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 SP3Q02447 781 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 SQLEQ14534 574 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 TCEA2Q15560 299 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 EEF1DP3Q658K8 133 aa12.92□□□□□ -0.34
SCN8A-209ENST00000627620 CLYBLQ8N0X4 340 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms