RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 IFT43Q96FT9 208 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 C7orf26Q96N11 449 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 PSKH2Q96QS6 385 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 KLF6Q99612 283 aaPredicted RBP16.56■□□□□ 0.24
LDB3-208ENST00000623007 TSSK1BQ9BXA7 367 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 PDFQ9HBH1 243 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 UBA2Q9UBT2 640 aaPredicted RBP16.56■□□□□ 0.24
LDB3-208ENST00000623007 LOC285095A0A1B0GVY8 99 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 TPP1O14773 563 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 TEX28O15482 410 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 UGT1A9O60656 530 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 H2AFYO75367 372 aaKnown RBP16.56■□□□□ 0.24
LDB3-208ENST00000623007 ATP5HO75947 161 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 FSBPO95073 299 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 F11P03951 625 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 RHOCP08134 193 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 MAGEA9P43362 315 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 KPNA2P52292 529 aaKnown RBP16.56■□□□□ 0.24
LDB3-208ENST00000623007 PRKAA2P54646 552 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 IL31Q6EBC2 164 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 NUDCD3Q8IVD9 361 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 CCDC63Q8NA47 563 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 MGME1Q9BQP7 344 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 CINPQ9BW66 212 aaPredicted RBP16.56■□□□□ 0.24
LDB3-208ENST00000623007 SLC13A1Q9BZW2 595 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 MTIF3Q9H2K0 278 aaKnown RBP16.56■□□□□ 0.24
LDB3-208ENST00000623007 UGT1A7Q9HAW7 530 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 UGT1A10Q9HAW8 530 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 UGT1A8Q9HAW9 530 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 TREX1Q9NSU2 369 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 PIH1D1Q9NWS0 290 aaKnown RBP16.56■□□□□ 0.24
LDB3-208ENST00000623007 SIRPGQ9P1W8 387 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 ZMYM5Q9UJ78 669 aa16.56■□□□□ 0.24
LDB3-208ENST00000623007 CHD5Q8TDI0 1954 aa16.55■□□□□ 0.24
LDB3-208ENST00000623007 ALDOAP04075 364 aaKnown RBP16.55■□□□□ 0.24
LDB3-208ENST00000623007 GRK2P25098 689 aa16.55■□□□□ 0.24
LDB3-208ENST00000623007 NMBRP28336 390 aa16.55■□□□□ 0.24
LDB3-208ENST00000623007 SLC6A4P31645 630 aa16.55■□□□□ 0.24
LDB3-208ENST00000623007 CD86P42081 329 aa16.55■□□□□ 0.24
LDB3-208ENST00000623007 UBE3AQ05086 875 aa16.55■□□□□ 0.24
LDB3-208ENST00000623007 NSUN2Q08J23 767 aaKnown RBP eCLIP16.55■□□□□ 0.24
LDB3-208ENST00000623007 TAF1BQ53T94 588 aaPredicted RBP16.55■□□□□ 0.24
LDB3-208ENST00000623007 FAM117BQ6P1L5 589 aa16.55■□□□□ 0.24
LDB3-208ENST00000623007 RDH11Q8TC12 318 aa16.55■□□□□ 0.24
LDB3-208ENST00000623007 PTPRN2Q92932 1015 aa16.55■□□□□ 0.24
LDB3-208ENST00000623007 USP13Q92995 863 aaPredicted RBP16.55■□□□□ 0.24
LDB3-208ENST00000623007 E2F7Q96AV8 911 aa16.55■□□□□ 0.24
LDB3-208ENST00000623007 GPR22Q99680 433 aa16.55■□□□□ 0.24
LDB3-208ENST00000623007 APOL2Q9BQE5 337 aa16.55■□□□□ 0.24
LDB3-208ENST00000623007 TRIM56Q9BRZ2 755 aaKnown RBP16.55■□□□□ 0.24
LDB3-208ENST00000623007 ZBED2Q9BTP6 218 aa16.55■□□□□ 0.24
LDB3-208ENST00000623007 ACE2Q9BYF1 805 aaPredicted RBP16.55■□□□□ 0.24
LDB3-208ENST00000623007 AGO1Q9UL18 857 aaKnown RBP16.55■□□□□ 0.24
LDB3-208ENST00000623007 SLC7A4O43246 635 aa16.54■□□□□ 0.24
LDB3-208ENST00000623007 BPGMP07738 259 aa16.54■□□□□ 0.24
LDB3-208ENST00000623007 TPH1P17752 444 aa16.54■□□□□ 0.24
LDB3-208ENST00000623007 DDX6P26196 483 aaKnown RBP eCLIP16.54■□□□□ 0.24
LDB3-208ENST00000623007 SKIV2L2P42285 1042 aaKnown RBP16.54■□□□□ 0.24
LDB3-208ENST00000623007 FPGSQ05932 587 aa16.54■□□□□ 0.24
LDB3-208ENST00000623007 POU6F1Q14863 301 aa16.54■□□□□ 0.24
LDB3-208ENST00000623007 MPP7Q5T2T1 576 aa16.54■□□□□ 0.24
LDB3-208ENST00000623007 FSTL4Q6MZW2 842 aa16.54■□□□□ 0.24
LDB3-208ENST00000623007 FAM47EQ6ZV65 393 aa16.54■□□□□ 0.24
LDB3-208ENST00000623007 FAM217AQ8IXS0 508 aa16.54■□□□□ 0.24
LDB3-208ENST00000623007 ARRDC2Q8TBH0 407 aa16.54■□□□□ 0.24
LDB3-208ENST00000623007 VPS39Q96JC1 886 aa16.54■□□□□ 0.24
LDB3-208ENST00000623007 MCMBPQ9BTE3 642 aa16.54■□□□□ 0.24
LDB3-208ENST00000623007 IARS2Q9NSE4 1012 aaKnown RBP16.54■□□□□ 0.24
LDB3-208ENST00000623007 TLK1Q9UKI8 766 aa16.54■□□□□ 0.24
LDB3-208ENST00000623007 CORO1CQ9ULV4 474 aaPredicted RBP16.54■□□□□ 0.24
LDB3-208ENST00000623007 ZBBXA8MT70 800 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 HNRNPCL1O60812 293 aaKnown RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 SNUPNO95149 360 aaKnown RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 HSPA8P11142 646 aaKnown RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 HDCP19113 662 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 CRABP2P29373 138 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 SLC7A9P82251 487 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 PDE1CQ14123 709 aaPredicted RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 INO80DQ53TQ3 878 aaPredicted RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 TSTD2Q5T7W7 516 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 OTOAQ7RTW8 1153 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 CPXM2Q8N436 756 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 DCLK2Q8N568 766 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 ZNF557Q8N988 423 aaPredicted RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 LEMD2Q8NC56 503 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 ZNF419Q96HQ0 510 aaPredicted RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 RAD9AQ99638 391 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 SEMA3CQ99985 751 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 TUBB6Q9BUF5 446 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 ZMYND15Q9H091 742 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 SNX15Q9NRS6 342 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 THAP1Q9NVV9 213 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 MTO1Q9Y2Z2 717 aaKnown RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 HTTP42858 3142 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 MIA3Q5JRA6 1907 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 H3BNC9 293 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 ITGB8P26012 769 aa16.53■□□□□ 0.24
LDB3-208ENST00000623007 HOXD9P28356 352 aaPredicted RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 SMAD3P84022 425 aaKnown RBP16.53■□□□□ 0.24
LDB3-208ENST00000623007 TMPRSS15P98073 1019 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms