RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 PTK2BQ14289 1009 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 HMBOX1Q6NT76 420 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 NIPAL1Q6NVV3 410 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 ZBTB49Q6ZSB9 765 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 HM13Q8TCT9 377 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 CHPT1Q8WUD6 406 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 SLCO4A1Q96BD0 722 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 SNX27Q96L92 541 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 NPLQ9BXD5 320 aaPredicted RBP13.2□□□□□ -0.3
CHD1L-210ENST00000622533 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHD1L-210ENST00000622533 VPS28Q9UK41 221 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 ZSWIM8A7E2V4 1837 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 A0A087WXM4 84 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 SAC3D1A6NKF1 404 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 TIPRLO75663 272 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 SLC25A27O95847 323 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 JUNP05412 331 aaKnown RBP13.2□□□□□ -0.3
CHD1L-210ENST00000622533 EPHX2P34913 555 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 HADHAP40939 763 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 LIMK2P53671 638 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 DPYSQ14117 519 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 ANKRD26P1Q6NSI1 321 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 CHST15Q7LFX5 561 aaPredicted RBP13.2□□□□□ -0.3
CHD1L-210ENST00000622533 TRPC4APQ8TEL6 797 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 PLEKHA5Q9HAU0 1116 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 SYBUQ9NX95 663 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 CDH7Q9ULB5 785 aa13.2□□□□□ -0.3
CHD1L-210ENST00000622533 A0A087WZ62 844 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.19□□□□□ -0.3
CHD1L-210ENST00000622533 NDUFB5O43674 189 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 TRIM13O60858 407 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 SULT1C4O75897 302 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 ARF4P18085 180 aaPredicted RBP13.19□□□□□ -0.3
CHD1L-210ENST00000622533 RPL34P49207 117 aaKnown RBP13.19□□□□□ -0.3
CHD1L-210ENST00000622533 ANKRD52Q8NB46 1076 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 RDH11Q8TC12 318 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 P2RY11Q96G91 374 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 CPB2Q96IY4 423 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 APBA2Q99767 749 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 FDXACB1Q9BRP7 624 aaPredicted RBP13.19□□□□□ -0.3
CHD1L-210ENST00000622533 FAM49BQ9NUQ9 324 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 C1orf232A0A0U1RR37 186 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 C9IYK1 514 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 NRP1O14786 923 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 TIMM44O43615 452 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 ERVK-10P10266 1014 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 GOT1P17174 413 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 RCVRNP35243 200 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 PGGT1BP53609 377 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 IRF9Q00978 393 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 RAB39AQ14964 217 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 DLG2Q15700 870 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 BCL2A1Q16548 175 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 LDLRAP1Q5SW96 308 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 ZC3H7AQ8IWR0 971 aaKnown RBP13.19□□□□□ -0.3
CHD1L-210ENST00000622533 DCLK2Q8N568 766 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 LRRC52Q8N7C0 313 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 SCAIQ8N9R8 606 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHD1L-210ENST00000622533 HSFY1Q96LI6 401 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 MRPL45Q9BRJ2 306 aaKnown RBP13.19□□□□□ -0.3
CHD1L-210ENST00000622533 ILKAPQ9H0C8 392 aaPredicted RBP13.19□□□□□ -0.3
CHD1L-210ENST00000622533 EFCAB1Q9HAE3 211 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 NCKIPSDQ9NZQ3 722 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 VPS51Q9UID3 782 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 FZD10Q9ULW2 581 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 SNX9Q9Y5X1 595 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 TNS1Q9HBL0 1735 aaKnown RBP13.19□□□□□ -0.3
CHD1L-210ENST00000622533 SLCO1B7G3V0H7 640 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 CSE1LP55060 971 aaKnown RBP13.19□□□□□ -0.3
CHD1L-210ENST00000622533 RGS21Q2M5E4 152 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 DCAF4L1Q3SXM0 396 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 NHSL2Q5HYW2 709 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 GALNT18Q6P9A2 607 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 CHSY3Q70JA7 882 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 PDZD4Q76G19 769 aaPredicted RBP13.19□□□□□ -0.3
CHD1L-210ENST00000622533 TMEM130Q8N3G9 435 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 CCDC185Q8N715 623 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 AGAP3Q96P47 875 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 LGMNQ99538 433 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 B3GNT5Q9BYG0 378 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 ANKRD60Q9BZ19 345 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 CAB39LQ9H9S4 337 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 POLR1BQ9H9Y6 1135 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 BFARQ9NZS9 450 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 GMPR2Q9P2T1 348 aaKnown RBP13.19□□□□□ -0.3
CHD1L-210ENST00000622533 AKT3Q9Y243 479 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 RAD54BQ9Y620 910 aa13.19□□□□□ -0.3
CHD1L-210ENST00000622533 WDR90Q96KV7 1748 aa13.18□□□□□ -0.3
CHD1L-210ENST00000622533 MAGEB16A2A368 324 aa13.18□□□□□ -0.3
CHD1L-210ENST00000622533 KCNU1A8MYU2 1149 aa13.18□□□□□ -0.3
CHD1L-210ENST00000622533 CFAP99D6REC4 459 aa13.18□□□□□ -0.3
CHD1L-210ENST00000622533 E7ENX8 843 aa13.18□□□□□ -0.3
CHD1L-210ENST00000622533 TFE3P19532 575 aaPredicted RBP13.18□□□□□ -0.3
CHD1L-210ENST00000622533 PSMB4P28070 264 aa13.18□□□□□ -0.3
CHD1L-210ENST00000622533 GTF2A2P52657 109 aa13.18□□□□□ -0.3
CHD1L-210ENST00000622533 NEDD8Q15843 81 aa13.18□□□□□ -0.3
CHD1L-210ENST00000622533 GK5Q6ZS86 529 aa13.18□□□□□ -0.3
CHD1L-210ENST00000622533 LPGAT1Q92604 370 aa13.18□□□□□ -0.3
CHD1L-210ENST00000622533 TAMM41Q96BW9 452 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms