RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 NUDT1P36639 197 aa18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 GEMIN4P57678 1058 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 NXPH1P58417 271 aa18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 YBEYP58557 167 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 ZNF284Q2VY69 593 aa18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 SETMARQ53H47 684 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 NEK5Q6P3R8 708 aa18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 CYP4V2Q6ZWL3 525 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 SLCO6A1Q86UG4 719 aa18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 HORMAD1Q86X24 394 aa18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 SPATS2Q86XZ4 545 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 ZNF354CQ86Y25 554 aa18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 UMODL1-AS1Q8N2C9 162 aa18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 RYBPQ8N488 228 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 SPC24Q8NBT2 197 aa18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 NETO2Q8NC67 525 aa18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 OR8K1Q8NGG5 319 aa18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 FNIP1Q8TF40 1166 aa18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 SYN2Q92777 582 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 PPP1R16AQ96I34 528 aa18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 DHX35Q9H5Z1 703 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 ZFR2Q9UPR6 939 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 ARID1BQ8NFD5 2236 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-213ENST00000621748 ZSCAN5CA6NGD5 496 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 PRAMEF26H0Y7S4 382 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 FGF10O15520 208 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 NRDCO43847 1150 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 PCDH8O95206 1070 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 TRIM16O95361 564 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 GSRP00390 522 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 ADRB3P13945 408 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 MIPP30301 263 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 NEK3P51956 506 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 TPI1P60174 286 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 SERINC3Q13530 473 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 STAT4Q14765 748 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 MYLK3Q32MK0 819 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 TDRD12Q587J7 1177 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 SLC45A4Q5BKX6 768 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 ATXN7L2Q5T6C5 722 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 ERMARDQ5T6L9 678 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 SEL1L3Q68CR1 1132 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 PARS2Q7L3T8 475 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 RAB44Q7Z6P3 723 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 GATAD2AQ86YP4 633 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 OR2AP1Q8NGE2 309 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 SNRNP25Q9BV90 132 aaKnown RBP18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 GDF3Q9NR23 364 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 KLK13Q9UKR3 277 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 SCINQ9Y6U3 715 aa18.25■□□□□ 0.51
SCAMP4-213ENST00000621748 C1QTNF9BB2RNN3 333 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 KRIT1O00522 736 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 LRCH4O75427 683 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 RNF8O76064 485 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 TMCC1O94876 653 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 GYPCP04921 128 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 SERPING1P05155 500 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 C1QTNF9P0C862 333 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 MYBL1P10243 752 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 HTR7P34969 479 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 GRK6P43250 576 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 SNRPD1P62314 119 aaKnown RBP18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 PARP15Q460N3 678 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 INO80DQ53TQ3 878 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 FBXL19Q6PCT2 694 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 IQCHQ86VS3 1027 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 TMEM145Q8NBT3 493 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 TRIM11Q96F44 468 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 KCTD15Q96SI1 283 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 CDC6Q99741 560 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 MYOCQ99972 504 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 TMEM121BQ9BXQ6 578 aaPredicted RBP18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 DEF6Q9H4E7 631 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 LRRC19Q9H756 370 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 FZD3Q9NPG1 666 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 TOR4AQ9NXH8 423 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 FADS3Q9Y5Q0 445 aa18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 TDRD6O60522 2096 aaKnown RBP18.24■□□□□ 0.51
SCAMP4-213ENST00000621748 USP24Q9UPU5 2620 aa18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 C16orf96A6NNT2 1141 aa18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 EEF2KO00418 725 aaKnown RBP18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 PRPSAP2O60256 369 aa18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 POP4O95707 220 aaKnown RBP18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 UGT2B4P06133 528 aa18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 PTMAP06454 111 aaKnown RBP18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 ATXN1LP0C7T5 689 aaKnown RBP18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 GSDMDP57764 484 aa18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 TMEM259Q4ZIN3 620 aa18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 ZNF805Q5CZA5 627 aa18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 SAP25Q8TEE9 199 aa18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 ADAMTS14Q8WXS8 1223 aa18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 CELF6Q96J87 481 aaKnown RBP18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 LRIG1Q96JA1 1093 aa18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 ERVMER34-1Q9H9K5 563 aa18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 MRPL47Q9HD33 250 aaKnown RBP18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 APOBEC2Q9Y235 224 aaKnown RBP18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 NEUROG3Q9Y4Z2 214 aa18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 WDFY3Q8IZQ1 3526 aa18.23■□□□□ 0.51
SCAMP4-213ENST00000621748 PTPRBP23467 1997 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms