RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 CALML6Q8TD86 181 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 COL26A1Q96A83 441 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 SKA1Q96BD8 255 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 LGMNQ99538 433 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 OMDQ99983 421 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 SNRNP25Q9BV90 132 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 EIF2AQ9BY44 585 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 CYP3A43Q9HB55 503 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 SH3BP4Q9P0V3 963 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 THEGQ9P2T0 379 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 KLHL3Q9UH77 587 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 STAU1O95793 577 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 GRIA1P42261 906 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 GEMP55040 296 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 SLC34A1Q06495 639 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 FAM110CQ1W6H9 321 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 DUSP28Q4G0W2 176 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 ISLR2Q6UXK2 745 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 UNC5AQ6ZN44 842 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 GET4Q7L5D6 327 aaPredicted RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 PARGQ86W56 976 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 MPP5Q8N3R9 675 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 ENDOVQ8N8Q3 282 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 FBXO27Q8NI29 283 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 BRI3BPQ8WY22 251 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 MTFMTQ96DP5 389 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 PTCD3Q96EY7 689 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 TSPAN17Q96FV3 270 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 C12orf42Q96LP6 360 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 SPATA16Q9BXB7 569 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 ASAH2Q9NR71 780 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 SLC17A6Q9P2U8 582 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 SCOCQ9UIL1 159 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 PLLPQ9Y342 182 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 WDR27A2RRH5 827 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 C2CD4BA6NLJ0 364 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 INPP4BO15327 924 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 ATXN1P54253 815 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 GBE1Q04446 702 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 SLC18A2Q05940 514 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 UBAP2LQ14157 1087 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 TTLL9Q3SXZ7 439 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 SCIMPQ6UWF3 145 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 UNC5BQ8IZJ1 945 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 POU5F2Q8N7G0 328 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 RBM15BQ8NDT2 890 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 PCDH19Q8TAB3 1148 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 ANKRD27Q96NW4 1050 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 GPR20Q99678 358 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 R3HDMLQ9H3Y0 253 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 ACSS2Q9NR19 701 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 ZNF212Q9UDV6 495 aa8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 NDRG2Q9UN36 371 aaKnown RBP8.38□□□□□ -1.07
PTPDC1-204ENST00000620992 SF3B1O75533 1304 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 CCL16O15467 120 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 MTSS1O43312 755 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 BAIAP3O94812 1187 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 IQCF3P0C7M6 154 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 UBTFL6P0CB48 400 aaPredicted RBP8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 STMN1P16949 149 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 PRIM2P49643 509 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 CCNG1P51959 295 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 CDCA2Q69YH5 1023 aaPredicted RBP8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 TRNP1Q6NT89 227 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 LINGO4Q6UY18 593 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 TREML1Q86YW5 311 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 SCUBE1Q8IWY4 988 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 CLEC4FQ8N1N0 589 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 MYLPFQ96A32 169 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 TSC22D3Q99576 134 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 LPIN3Q9BQK8 851 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 POPDC2Q9HBU9 364 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 PCDH18Q9HCL0 1135 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 THG1LQ9NWX6 298 aaKnown RBP8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 TRPC4Q9UBN4 977 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 PCDHB9Q9Y5E1 797 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 PRR5-ARHGAP8B1AHC4 643 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 C9IYK1 514 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 ABLIM1O14639 778 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 LYPLA1O75608 230 aaPredicted RBP8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 METTL18O95568 372 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 GLP2RO95838 553 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 ERVK-10P10266 1014 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 FMO4P31512 558 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 RAB27AP51159 221 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 GJA9P57773 515 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 ARHGAP8P85298 464 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 WASHC5Q12768 1159 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 ACAP1Q15027 740 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 HECTD3Q5T447 861 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 PPP1R26Q5T8A7 1209 aaPredicted RBP8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 PMF1Q6P1K2 205 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 SETD3Q86TU7 594 aaPredicted RBP8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 EBF4Q9BQW3 602 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 BCO2Q9BYV7 579 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 PHACTR1Q9C0D0 580 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 USP29Q9HBJ7 922 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 SPATS2LQ9NUQ6 558 aaKnown RBP8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 IL1RAPL1Q9NZN1 696 aa8.37□□□□□ -1.07
PTPDC1-204ENST00000620992 STX18Q9P2W9 335 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms