RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 COG7P83436 770 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 CHSY3Q70JA7 882 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 LPCAT2Q7L5N7 544 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 APOBEC3FQ8IUX4 373 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 HERC6Q8IVU3 1022 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 MFSD6LQ8IWD5 586 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 BEST2Q8NFU1 509 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 DUS3LQ96G46 650 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 OMDQ99983 421 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 LRRC4Q9HBW1 653 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 MRPL40Q9NQ50 206 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 PNPLA3Q9NST1 481 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 CACNA2D2Q9NY47 1150 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 IPO11Q9UI26 975 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 ACOT9Q9Y305 439 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 RAD54BQ9Y620 910 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 SQORQ9Y6N5 450 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 PLOD2O00469 737 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 LGALS2P05162 132 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 IMPDH2P12268 514 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 ARSAP15289 507 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 RALGDSQ12967 914 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 SEMA3BQ13214 749 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 DCAF4L1Q3SXM0 396 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 REP15Q6BDI9 236 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 CNSTQ6PJW8 725 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 POTEHQ6S545 545 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 PDZD4Q76G19 769 aaPredicted RBP19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 CEP97Q8IW35 865 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 RBM12BQ8IXT5 1001 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 TXNDC5Q8NBS9 432 aaKnown RBP19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 WNT8BQ93098 351 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 KIFC1Q9BW19 673 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 SNX13Q9Y5W8 968 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 CROCCQ5TZA2 2017 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 HEATR9A2RTY3 570 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 I6L893 689 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 TRAP1Q12931 704 aaKnown RBP19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 SPATA6LQ8N4H0 392 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 RMND5BQ96G75 393 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 BIRC8Q96P09 236 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 CIB1Q99828 191 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 UNKQ9C0B0 810 aaKnown RBP19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 OSBPL2Q9H1P3 480 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 UBP1Q9NZI7 540 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 TRHDEQ9UKU6 1024 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 CNOT6Q9ULM6 557 aaKnown RBP19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 STAP1Q9ULZ2 295 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 BPTFQ12830 3046 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 PRORSD1PA6NEY8 169 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 FAM155AB1AL88 458 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 SPTLC1O15269 473 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 HTRA2O43464 458 aaPredicted RBP19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 HDCP19113 662 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 SLC7A1P30825 629 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 ADRA1BP35368 520 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 NDUFV1P49821 464 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 RAB10P61026 200 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 TUBA4AP68366 448 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 ITPRIPL1Q6GPH6 555 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 DUS1LQ6P1R4 473 aaKnown RBP19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 KLHL35Q6PF15 583 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 DHRS4L2Q6PKH6 230 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 HFE2Q6ZVN8 426 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 SPPL2BQ8TCT7 592 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 GFM2Q969S9 779 aaKnown RBP19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 SLC2A13Q96QE2 648 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 TRPC7Q9HCX4 862 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 CD300AQ9UGN4 299 aa19.8■□□□□ 0.76
PDLIM3-212ENST00000620787 NCAM2O15394 837 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 ZSCAN9O15535 394 aaPredicted RBP19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 TPI1P60174 286 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 MPP1Q00013 466 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 CDH17Q12864 832 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 STX5Q13190 355 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 TMED1Q13445 227 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 C6orf10Q5SRN2 563 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 GJC2Q5T442 439 aaPredicted RBP19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 KRT80Q6KB66 452 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 FIBCD1Q8N539 461 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 ABTB1Q969K4 478 aaPredicted RBP19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 HDAC11Q96DB2 347 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 ANKRD60Q9BZ19 345 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 SNX25Q9H3E2 840 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 GTSE1Q9NYZ3 720 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 DNAJC25-GNG10A0A024R161 153 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 ARHGAP1Q07960 439 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 SQLEQ14534 574 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 FBXO47Q5MNV8 452 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 DENND6AQ8IWF6 608 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 KLHL23Q8NBE8 558 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 HM13Q8TCT9 377 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 MIPOL1Q8TD10 442 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 RANBP9Q96S59 729 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 EIF2AQ9BY44 585 aaKnown RBP19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 MRPL46Q9H2W6 279 aaKnown RBP19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 POMKQ9H5K3 350 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 DUS2Q9NX74 493 aaKnown RBP19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 NCKIPSDQ9NZQ3 722 aa19.79■□□□□ 0.76
PDLIM3-212ENST00000620787 ZNF510Q9Y2H8 683 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms