RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 XPO7Q9UIA9 1087 aaKnown RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 GJA3Q9Y6H8 435 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 MYH9P35579 1960 aaKnown RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 CCDC195A0A1B0GUA6 201 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 ZNF254O75437 659 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 KCNH1O95259 989 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 ICAM1P05362 532 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 CFHP08603 1231 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 TCF4P15884 667 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 IDH3AP50213 366 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 CLCNKBP51801 687 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 NME5P56597 212 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 SNRPFP62306 86 aaKnown RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 RACK1P63244 317 aaKnown RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 PRAMEP78395 509 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 GCNT1Q02742 428 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 CLCQ05315 142 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 TARDBPQ13148 414 aaKnown RBP eCLIP10.49□□□□□ -0.73
VPS11-207ENST00000620429 FAM102BQ5T8I3 360 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 NBPF12Q5TAG4 269 aaPredicted RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 ENOSF1Q7L5Y1 443 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 TFAP2DQ7Z6R9 452 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 BRSK2Q8IWQ3 736 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 RCOR2Q8IZ40 523 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 SLITRK1Q96PX8 696 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 CDRT15Q96T59 188 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 CSF3RQ99062 836 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 MTG1Q9BT17 334 aaPredicted RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 GON7Q9BXV9 100 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 KCNN2Q9H2S1 579 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 NPAP1Q9NZP6 1156 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 COPG2Q9UBF2 871 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 ZNF221Q9UK13 617 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 PCM1Q15154 2024 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 ARPC4-TTLL3A0A0A6YYG9 625 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 FAM25AB3EWG3 89 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 FAM25CB3EWG5 89 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 FAM25GB3EWG6 89 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 TK2O00142 265 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 GPR25O00155 361 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 SLC9A3R1O14745 358 aaPredicted RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 ZMPSTE24O75844 475 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 SLC9A3P48764 834 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 MRPS5P82675 430 aaKnown RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 BST2Q10589 180 aaKnown RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 KLF10Q13118 480 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 CEACAM7Q14002 265 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 GTF2IRD2BQ6EKJ0 949 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 ERAP2Q6P179 960 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 USP37Q86T82 979 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 GTF2IRD2Q86UP8 949 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 ZNF677Q86XU0 584 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 RHPN2Q8IUC4 686 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 SNX29P2Q8IUI4 249 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 MICALL2Q8IY33 904 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 ZCCHC7Q8N3Z6 543 aaKnown RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 DTX3Q8N9I9 347 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 ANKRD53Q8N9V6 530 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 KYQ8NBH2 561 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 CMASQ8NFW8 434 aaPredicted RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 TMC2Q8TDI7 906 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 PMEPA1Q969W9 287 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 ACSF2Q96CM8 615 aaPredicted RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 DUS3LQ96G46 650 aaKnown RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 RIT2Q99578 217 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 SENP7Q9BQF6 1050 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 BEGAINQ9BUH8 593 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 ADAMTS10Q9H324 1103 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 NARFLQ9H6Q4 476 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 PLEKHA5Q9HAU0 1116 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 SCPEP1Q9HB40 452 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 ADARB2Q9NS39 739 aaKnown RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 KCNH7Q9NS40 1196 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 TNFRSF10DQ9UBN6 386 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 PACSIN3Q9UKS6 424 aa10.49□□□□□ -0.73
VPS11-207ENST00000620429 CAB39Q9Y376 341 aaPredicted RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 FARP1Q9Y4F1 1045 aaPredicted RBP10.49□□□□□ -0.73
VPS11-207ENST00000620429 CCNKO75909 580 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 INHBAP08476 426 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 SLC26A3P40879 764 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 GMPSP49915 693 aaPredicted RBP10.48□□□□□ -0.73
VPS11-207ENST00000620429 CYP24A1Q07973 514 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 NAB1Q13506 487 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 GALNT3Q14435 633 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 TAF5Q15542 800 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 MSS51Q4VC12 460 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 FAM171BQ6P995 826 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 DGLUCYQ7Z3D6 616 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 MAVSQ7Z434 540 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 PCGF5Q86SE9 256 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 PALM2Q8IXS6 379 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 PHTF2Q8N3S3 785 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 ANKFN1Q8N957 763 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 SLC2A14Q8TDB8 520 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 BTN2A3PQ96KV6 586 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 TAAR1Q96RJ0 339 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 IL12RB2Q99665 862 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 MXRA8Q9BRK3 442 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 TMEM246Q9BRR3 403 aa10.48□□□□□ -0.73
VPS11-207ENST00000620429 SEMA6AQ9H2E6 1030 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms