RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 RSPH9Q9H1X1 276 aaPredicted RBP6.19□□□□□ -1.42
SSX4B-202ENST00000619890 SGK2Q9HBY8 427 aa6.19□□□□□ -1.42
SSX4B-202ENST00000619890 PRSS16Q9NQE7 514 aa6.19□□□□□ -1.42
SSX4B-202ENST00000619890 ITM2CQ9NQX7 267 aa6.19□□□□□ -1.42
SSX4B-202ENST00000619890 OR12D3Q9UGF7 316 aa6.19□□□□□ -1.42
SSX4B-202ENST00000619890 LCMT1Q9UIC8 334 aa6.19□□□□□ -1.42
SSX4B-202ENST00000619890 INTS6Q9UL03 887 aaKnown RBP6.19□□□□□ -1.42
SSX4B-202ENST00000619890 FZD4Q9ULV1 537 aa6.19□□□□□ -1.42
SSX4B-202ENST00000619890 HS3ST2Q9Y278 367 aa6.19□□□□□ -1.42
SSX4B-202ENST00000619890 SETD2Q9BYW2 2564 aaPredicted RBP6.19□□□□□ -1.42
SSX4B-202ENST00000619890 BOD1L1Q8NFC6 3051 aa6.19□□□□□ -1.42
SSX4B-202ENST00000619890 PCDH15Q96QU1 1955 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 POLQO75417 2590 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 LRBAP50851 2863 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 CENPEQ02224 2701 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 ILVBLA1L0T0 632 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 FAM149AA5PLN7 773 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 GOLGA6L3A6NEY3 463 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 ZSCAN5CA6NGD5 496 aaPredicted RBP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 MEI4A8MW99 385 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 C1QTNF3-AMACRE9PGA6 284 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 I6L893 689 aaPredicted RBP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 DDX3XO00571 662 aaKnown RBP eCLIP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 RRP8O43159 456 aaKnown RBP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 SLC7A4O43246 635 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 SIAH2O43255 324 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 SIN3BO75182 1162 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 RNF8O76064 485 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 ATXN1LP0C7T5 689 aaKnown RBP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 HLA-EP13747 358 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 GNSP15586 552 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 PSMA2P25787 234 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 MZF1P28698 734 aaPredicted RBP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 HNRNPH3P31942 346 aaKnown RBP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 L1CAMP32004 1257 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 IRAK1P51617 712 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 RPS14P62263 151 aaKnown RBP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 RPL7AP62424 266 aaKnown RBP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 GNA12Q03113 381 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 ZNF33AQ06730 810 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 MAMLD1Q13495 774 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 CST6Q15828 149 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 ALFQ53S48 1182 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 FAM46CQ5VWP2 391 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 HGSNATQ68CP4 663 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 RETSATQ6NUM9 610 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 WDR59Q6PJI9 974 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 SARM1Q6SZW1 724 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 C14orf80Q86SX3 495 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 CACUL1Q86Y37 369 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 PSTKQ8IV42 348 aaKnown RBP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 CNGA4Q8IV77 575 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 APCDD1Q8J025 514 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 GALNT15Q8N3T1 639 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 SH2D3CQ8N5H7 860 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 CCDC185Q8N715 623 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 ZNF366Q8N895 744 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 ALG14Q96F25 216 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 ZNF419Q96HQ0 510 aaPredicted RBP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 HSPA12BQ96MM6 686 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 CEP44Q9C0F1 390 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 BTBD1Q9H0C5 482 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 ISCUQ9H1K1 167 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 SLC6A17Q9H1V8 727 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 PABPC3Q9H361 631 aaKnown RBP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 CATSPERBQ9H7T0 1116 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 ANLNQ9NQW6 1124 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 TMEM248Q9NWD8 314 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 WSB2Q9NYS7 404 aaPredicted RBP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 MAP10Q9P2G4 905 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 ZNF212Q9UDV6 495 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 CNOT8Q9UFF9 292 aaKnown RBP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 ADAMTS1Q9UHI8 967 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 VPS51Q9UID3 782 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 FKBPLQ9UIM3 349 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 PCOLCE2Q9UKZ9 415 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 NEU3Q9UQ49 428 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 NCKAP1Q9Y2A7 1128 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 OR51B4Q9Y5P0 310 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 PTPRBP23467 1997 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 ATXN2Q99700 1313 aaKnown RBP6.18□□□□□ -1.42
SSX4B-202ENST00000619890 AHCTF1Q8WYP5 2266 aa6.18□□□□□ -1.42
SSX4B-202ENST00000619890 PI4KAP42356 2102 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 TP53BP1Q12888 1972 aaPredicted RBP6.17□□□□□ -1.42
SSX4B-202ENST00000619890 KNTC1P50748 2209 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 SSU72P8A0A1W2PR75 194 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 FAM170AA1A519 330 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 TMEM191CA6NGB0 347 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 SOWAHDA6NJG2 315 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 LRRC72A6NJI9 287 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 WASH4PA8MWX3 477 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 TMCO5BA8MYB1 307 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 PRPSAP2O60256 369 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 RAMP2O60895 175 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 SRGAP2O75044 1071 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 CNTN5O94779 1100 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 LRIG2O94898 1065 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 GJB6O95452 261 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 SEMA4FO95754 770 aa6.17□□□□□ -1.42
SSX4B-202ENST00000619890 FTLP02792 175 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms