RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 TOP3AQ13472 1001 aaPredicted RBP11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 CAVIN3Q969G5 261 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 NMD3Q96D46 503 aaKnown RBP11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 CACNB4O00305 520 aaPredicted RBP11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 NFKB1P19838 968 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 GPD2P43304 727 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 MYBPC1Q00872 1141 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 LSM12Q3MHD2 195 aaKnown RBP11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 ZNF571Q7Z3V5 609 aaPredicted RBP11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 TSPAN14Q8NG11 270 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 TCP10LQ8TDR4 215 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 CDADC1Q9BWV3 514 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 OR12D3Q9UGF7 316 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 RIPK2O43353 540 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 CTDNEP1O95476 244 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 ASGR1P07306 291 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 CCNYL3P0C7X3 344 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 NR2F1P10589 423 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 AMPD1P23109 780 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 CCNIQ14094 377 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 PRR23CQ6ZRP0 262 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 ZC3H7AQ8IWR0 971 aaKnown RBP11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 SEMA6BQ9H3T3 888 aa11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.28□□□□□ -0.6
CCDC144B-208ENST00000618081 UBE2QL1A1L167 161 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 MT-CO1P00395 513 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 LYNP07948 512 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 CES1P23141 567 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 PLK1P53350 603 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 RAB2AP61019 212 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 GRM3Q14832 879 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 ARMC8Q8IUR7 673 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 EEF1AKMT1Q8WVE0 214 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 MYLPFQ96A32 169 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 RIOX1Q9H6W3 641 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 KLQ9UEF7 1012 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 IRAK3Q9Y616 596 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 APOC4-APOC2K7ER74 178 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 APOC2P02655 101 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 PSTKQ8IV42 348 aaKnown RBP11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 SENP8Q96LD8 212 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 RTFDC1Q9BY42 306 aaPredicted RBP11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 LMAN2LQ9H0V9 348 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 CKLFQ9UBR5 152 aa11.27□□□□□ -0.6
CCDC144B-208ENST00000618081 LMTK2Q8IWU2 1503 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 GSAPA4D1B5 854 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 ATP9AO75110 1047 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 PFKPQ01813 784 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 PARP6Q2NL67 630 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 GALNT18Q6P9A2 607 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 SLC30A10Q6XR72 485 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 DEPDC4Q8N2C3 294 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 MORF4L1Q9UBU8 362 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 PHF11Q9UIL8 331 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 LOC100506127A0A0U1RQW1 187 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 MRPS6P82932 125 aaKnown RBP11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 SMCO1Q147U7 214 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 STXBP5Q5T5C0 1151 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 MYDGFQ969H8 173 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 ZNF354BQ96LW1 612 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 AASDHPPTQ9NRN7 309 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 MRPS33Q9Y291 106 aaKnown RBP11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 HOXC12P31275 282 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 PDX1P52945 283 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 TAS2R41P59536 307 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 HSPA14Q0VDF9 509 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 BMPR2Q13873 1038 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 CXXC5Q7LFL8 322 aaKnown RBP11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 DENND1CQ8IV53 801 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 C8orf59Q8N0T1 100 aaPredicted RBP11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 MCM8Q9UJA3 840 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 CDH9Q9ULB4 789 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 DUSP10Q9Y6W6 482 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 URB1O60287 2271 aaKnown RBP11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 VWDEQ8N2E2 1590 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 A0A0B4J269 797 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 TBL1XO60907 577 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 SH3BGRLO75368 114 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 MFN2O95140 757 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 MYL9P24844 172 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 BCAP31P51572 246 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 DHRSXQ8N5I4 330 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 HJURPQ8NCD3 748 aaPredicted RBP11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 FBXO25Q8TCJ0 367 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 NEK7Q8TDX7 302 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 PTPRHQ9HD43 1115 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 MRASO14807 208 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 SERPINB7O75635 380 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 CCNB1P14635 433 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 HDCP19113 662 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 MBTD1Q05BQ5 628 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 RRP1BQ14684 758 aaKnown RBP11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 PAPD7Q5XG87 772 aaKnown RBP11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 TRIM40Q6P9F5 258 aa11.27□□□□□ -0.61
CCDC144B-208ENST00000618081 CEP68Q76N32 757 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms