RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 PABPC3Q9H361 631 aaKnown RBP11.04□□□□□ -0.64
POLR2A-209ENST00000617998 KLHL28Q9NXS3 571 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 C19orf25Q9UFG5 118 aaPredicted RBP11.04□□□□□ -0.64
POLR2A-209ENST00000617998 MAFFQ9ULX9 164 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 A0A1W2PQC6 194 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 H3BNH8 94 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 TXNDC9O14530 226 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 AKAP3O75969 853 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 FMO4P31512 558 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 SIM1P81133 766 aaPredicted RBP11.04□□□□□ -0.64
POLR2A-209ENST00000617998 HOMEZQ8IX15 550 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 VAT1Q99536 393 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 USP29Q9HBJ7 922 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 SETD1AO15047 1707 aaKnown RBP11.04□□□□□ -0.64
POLR2A-209ENST00000617998 CLEC3AO75596 197 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 MYL2P10916 166 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 COMTP21964 271 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 UGT1A1P22309 533 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 PON1P27169 355 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 PPP2R1BP30154 601 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 SERPINB9P50453 376 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 EVX2Q03828 476 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 SLC9A5Q14940 896 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 SGCBQ16585 318 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 SLC51AQ86UW1 340 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 LINC01553A4QN01 128 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 PSTPIP1O43586 416 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 DUX1O43812 170 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 RRP1BQ14684 758 aaKnown RBP11.04□□□□□ -0.64
POLR2A-209ENST00000617998 RNF19BQ6ZMZ0 732 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 FAM183BPQ6ZVS7 135 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 CATSPERZQ9NTU4 200 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 NCKIPSDQ9NZQ3 722 aa11.04□□□□□ -0.64
POLR2A-209ENST00000617998 FCF1Q9Y324 198 aaKnown RBP11.04□□□□□ -0.64
POLR2A-209ENST00000617998 GLI1P08151 1106 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 JAK1P23458 1154 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 ITGA3P26006 1051 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 CPA2P48052 419 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 LONRF1Q17RB8 773 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 ATP13A5Q4VNC0 1218 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 SLC9A9Q8IVB4 645 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 ACAT2Q9BWD1 397 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 FAM96AQ9H5X1 160 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 KCNK1O00180 336 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 SLC25A12O75746 678 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 WARSP23381 471 aaKnown RBP11.03□□□□□ -0.64
POLR2A-209ENST00000617998 FNTAP49354 379 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 ZC3H12BQ5HYM0 836 aaKnown RBP11.03□□□□□ -0.64
POLR2A-209ENST00000617998 PACS1Q6VY07 963 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 ZNF280BQ86YH2 543 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 MRPL43Q8N983 215 aaKnown RBP11.03□□□□□ -0.64
POLR2A-209ENST00000617998 PBX4Q9BYU1 374 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 CD84Q9UIB8 345 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 PNMA6AP0CW24 399 aaPredicted RBP11.03□□□□□ -0.64
POLR2A-209ENST00000617998 CSKP41240 450 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 TMEM119Q4V9L6 283 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 ALFQ53S48 1182 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 BTBD9Q96Q07 612 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 FAM83CQ9BQN1 747 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 PGAP2Q9UHJ9 254 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 GTF2A1LQ9UNN4 478 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 FAM86C2PA6NEL3 165 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 SDR42E2A6NKP2 422 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 CD2BP2O95400 341 aaKnown RBP11.03□□□□□ -0.64
POLR2A-209ENST00000617998 KRT6AP02538 564 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 KRT6BP04259 564 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 CST5P28325 142 aaPredicted RBP11.03□□□□□ -0.64
POLR2A-209ENST00000617998 TNFRSF4P43489 277 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 KRT6CP48668 564 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 NTHL1P78549 312 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 ALDH6A1Q02252 535 aaKnown RBP11.03□□□□□ -0.64
POLR2A-209ENST00000617998 C2orf54Q08AI8 447 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 DENND1BQ6P3S1 775 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 KLHL24Q6TFL4 600 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 FAM151BQ6UXP7 276 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 FAM126BQ8IXS8 530 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 KIAA2013Q8IYS2 634 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 LTN1O94822 1766 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 TTC26A0AVF1 554 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 HAPLN1P10915 354 aaPredicted RBP11.03□□□□□ -0.64
POLR2A-209ENST00000617998 NEK2P51955 445 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 SLC18A3Q16572 532 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 FNBP1LQ5T0N5 605 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 HECTD2Q5U5R9 776 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 DGLUCYQ7Z3D6 616 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 OR5B17Q8NGF7 314 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 FRMD8P1Q9BZ68 369 aaPredicted RBP11.03□□□□□ -0.64
POLR2A-209ENST00000617998 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.03□□□□□ -0.642e-6■□□□□ 9.4
POLR2A-209ENST00000617998 IL1RAPL1Q9NZN1 696 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 PSMD13Q9UNM6 376 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 HCFC2Q9Y5Z7 792 aa11.03□□□□□ -0.64
POLR2A-209ENST00000617998 GNA12Q03113 381 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 DNAAF5Q86Y56 855 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 TEX19Q8NA77 164 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 SGF29Q96ES7 293 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 CYTH2Q99418 400 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 OSBPL1AQ9BXW6 950 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 FBRSQ9HAH7 460 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 ERVK-5Q9HDB9 667 aa11.02□□□□□ -0.64
POLR2A-209ENST00000617998 ACSS2Q9NR19 701 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms