RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 VBP1P61758 197 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 CCNA1P78396 465 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 ROR1Q01973 937 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 COL19A1Q14993 1142 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 SCYL2Q6P3W7 929 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 USP17L1Q7RTZ2 530 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 STX12Q86Y82 276 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 C10orf107Q8IVU9 208 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 MAPKAPK5Q8IW41 473 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 HERVK_113Q902F9 699 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 SLC39A13Q96H72 371 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 SNX18Q96RF0 628 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 NUDT5Q9UKK9 219 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 SNX7Q9UNH6 387 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 TMEM5Q9Y2B1 443 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 PCDHB4Q9Y5E5 795 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 TEX51A0A1B0GUA7 166 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 GTPBP10A4D1E9 387 aaKnown RBP7.47□□□□□ -1.21
PDE6A-205ENST00000617647 POLRMTO00411 1230 aaKnown RBP7.47□□□□□ -1.21
PDE6A-205ENST00000617647 SLC37A4O43826 429 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 BCAS1O75363 584 aaPredicted RBP7.47□□□□□ -1.21
PDE6A-205ENST00000617647 AMHP03971 560 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 CBX5P45973 191 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 RPS9P46781 194 aaKnown RBP7.47□□□□□ -1.21
PDE6A-205ENST00000617647 OSTNP61366 133 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 TFAMQ00059 246 aaKnown RBP7.47□□□□□ -1.21
PDE6A-205ENST00000617647 GABPAQ06546 454 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 SMTNL2Q2TAL5 461 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 PLEKHG6Q3KR16 790 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 FNBP1LQ5T0N5 605 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 ZNF773Q6PK81 442 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 CHSY3Q70JA7 882 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 LUZP2Q86TE4 346 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 MS4A4AQ96JQ5 239 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 GAD1Q99259 594 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 SLC2A11Q9BYW1 496 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 IFT22Q9H7X7 185 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 WASH6PQ9NQA3 447 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 ING3Q9NXR8 418 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 SAE1Q9UBE0 346 aaPredicted RBP7.47□□□□□ -1.21
PDE6A-205ENST00000617647 SLC9A2Q9UBY0 812 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 DCDC2Q9UHG0 476 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 CDH7Q9ULB5 785 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 SPATA2Q9UM82 520 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 PCDHB8Q9UN66 801 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.47□□□□□ -1.21
PDE6A-205ENST00000617647 ZNF536O15090 1300 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 CAMTA1Q9Y6Y1 1673 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 KLF11O14901 512 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 SSX5O60225 188 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 BCAS2O75934 225 aaPredicted RBP7.47□□□□□ -1.21
PDE6A-205ENST00000617647 MT-CO1P00395 513 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 PIM1P11309 404 aaPredicted RBP7.47□□□□□ -1.21
PDE6A-205ENST00000617647 PCNAP12004 261 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 NPR1P16066 1061 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 ATP6V1B2P21281 511 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 TGM2P21980 687 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 KCNA5P22460 613 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 AZGP1P25311 298 aaKnown RBP7.47□□□□□ -1.21
PDE6A-205ENST00000617647 PRKCEQ02156 737 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 RUNX1T1Q06455 604 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 GALNT1Q10472 559 aaPredicted RBP7.47□□□□□ -1.21
PDE6A-205ENST00000617647 FUT11Q495W5 492 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 CBWD6Q4V339 395 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 CBWD3Q5JTY5 395 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 CBWD5Q5RIA9 395 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 MFSD7Q6UXD7 560 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 CATSPER4Q7RTX7 472 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 GALNT13Q8IUC8 556 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 LGI2Q8N0V4 545 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 LILRA2Q8N149 483 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 ACTL9Q8TC94 416 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 DCAKDQ8WVC6 231 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 SLC44A1Q8WWI5 657 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 SLCO2A1Q92959 643 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 CEP170P1Q96L14 293 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 FUNDC2Q9BWH2 189 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 ANKRD60Q9BZ19 345 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 PIF1Q9H611 641 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 ADAMTS7Q9UKP4 1686 aa7.47□□□□□ -1.21
PDE6A-205ENST00000617647 SLC22A1O15245 554 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 PROSCO94903 275 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 NPPAP01160 153 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 PSMA2P25787 234 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 ELK4P28324 431 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 CD40LGP29965 261 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 GRIK1P39086 918 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 SLC26A3P40879 764 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 FXR2P51116 673 aaKnown RBP eCLIP7.46□□□□□ -1.21
PDE6A-205ENST00000617647 PPP5CP53041 499 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 IFITM2Q01629 132 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 PICALMQ13492 652 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 CEACAM7Q14002 265 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 NFE2L1Q14494 772 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 ATP13A4Q4VNC1 1196 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 SPATC1Q76KD6 591 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 KRT28Q7Z3Y7 464 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 UBE2J2Q8N2K1 259 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 FEM1CQ96JP0 617 aa7.46□□□□□ -1.21
PDE6A-205ENST00000617647 RNF145Q96MT1 663 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms