RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 GRB14Q14449 540 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 PFKFB3Q16875 520 aaPredicted RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 ARMC12Q5T9G4 340 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 HHATQ5VTY9 493 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 TMC5Q6UXY8 1006 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 TMPPEQ6ZT21 453 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 ZNF527Q8NB42 609 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 DTX3LQ8TDB6 740 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 NAF1Q96HR8 494 aaKnown RBP3.4□□□□□ -1.87
LPP-220ENST00000617246 HS3ST3A1Q9Y663 406 aa3.4□□□□□ -1.87
LPP-220ENST00000617246 IFNB1P01574 187 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ERBB2P04626 1255 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 GPD1P21695 349 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 HSPA13P48723 471 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 PSMC6P62333 389 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 NIPAL4Q0D2K0 466 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 HP1BP3Q5SSJ5 553 aaPredicted RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 KXD1Q9BQD3 176 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 PTGES2Q9H7Z7 377 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 SNTG2Q9NY99 539 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 APOBEC3BQ9UH17 382 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 LRIT2A6NDA9 550 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 HIST1H2ABP04908 130 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 SRFP11831 508 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 YBX3P16989 372 aaKnown RBP eCLIP3.39□□□□□ -1.87
LPP-220ENST00000617246 MAP3K7CLP57077 242 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 PCDH1Q08174 1060 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 MTF1Q14872 753 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 INAQ16352 499 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 HIST3H2AQ7L7L0 130 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 WDR49Q8IV35 697 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.39□□□□□ -1.87
LPP-220ENST00000617246 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 HIST1H2ACQ93077 130 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 JSRP1Q96MG2 331 aaPredicted RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 AMDHD1Q96NU7 426 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 SLC6A16Q9GZN6 736 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ABCB10Q9NRK6 738 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 E2F8A0AVK6 867 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 CRYABP02511 175 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 ANPEPP15144 967 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 OR2W6PQ8NHA6 318 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 TRMOQ9BU70 441 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 BLZF1Q9H2G9 400 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.39□□□□□ -1.87
LPP-220ENST00000617246 MORF4L1Q9UBU8 362 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 NUDT5Q9UKK9 219 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 FAF1Q9UNN5 650 aaPredicted RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 HS3ST4Q9Y661 456 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 DCTN3O75935 186 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 IL33O95760 270 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 SRPRAP08240 638 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 FKBP3Q00688 224 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 TMEM35AQ53FP2 167 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 TMEM270Q6UE05 265 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 KIAA2013Q8IYS2 634 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 TAS1R2Q8TE23 839 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 CPT1BQ92523 772 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 CNOT6LQ96LI5 555 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 RTFDC1Q9BY42 306 aaPredicted RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 NCOA5Q9HCD5 579 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 TAS2R16Q9NYV7 291 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 CALCOCO1Q9P1Z2 691 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 TLX3O43711 291 aaPredicted RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 TOM1L1O75674 476 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 VDRP11473 427 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 PKMP14618 531 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 DGKQP52824 942 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 CBWD3Q5JTY5 395 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 CBWD5Q5RIA9 395 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 AMIGO1Q86WK6 493 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 RBM12BQ8IXT5 1001 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 MLKLQ8NB16 471 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 EIF2AK1Q9BQI3 630 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 POPDC2Q9HBU9 364 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 MAD2L2Q9UI95 211 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 SYCE1LA8MT33 242 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 AGTP01019 485 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 RHOP08100 348 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ITIH2P19823 946 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 DOC2BQ14184 412 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 KRT77Q7Z794 578 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ALYREFQ86V81 257 aaKnown RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 CDYL2Q8N8U2 506 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ERLEC1Q96DZ1 483 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 ZBTB40Q9NUA8 1239 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 KLRF1Q9NZS2 232 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 DNMT3AQ9Y6K1 912 aaPredicted RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 hCG_1809904A0A1W2PP81 198 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 A0A1W2PPE2 198 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 A0A1W2PR64 198 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 A0A1W2PRV1 198 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 PPP1R37O75864 691 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 LRIG2O94898 1065 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 P04436 131 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 RPA1P27694 616 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 MAP2K4P45985 399 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 RASSF6Q6ZTQ3 369 aa3.39□□□□□ -1.87
LPP-220ENST00000617246 C11orf57Q6ZUT1 292 aaPredicted RBP3.39□□□□□ -1.87
LPP-220ENST00000617246 OR4C15Q8NGM1 316 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms