RNA–Protein interactions for RNA: ENST00000616684.4

CDH23-212, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 4,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-212ENST00000616684 ATP6AP2O75787 350 aa18.83■□□□□ 0.6
CDH23-212ENST00000616684 DLGAP3O95886 979 aa18.83■□□□□ 0.6
CDH23-212ENST00000616684 CDC25CP30307 473 aa18.83■□□□□ 0.6
CDH23-212ENST00000616684 TTPAP49638 278 aa18.83■□□□□ 0.6
CDH23-212ENST00000616684 RPS7P62081 194 aaKnown RBP18.83■□□□□ 0.6
CDH23-212ENST00000616684 DCLRE1AQ6PJP8 1040 aa18.83■□□□□ 0.6
CDH23-212ENST00000616684 SYT12Q8IV01 421 aa18.83■□□□□ 0.6
CDH23-212ENST00000616684 HDAC10Q969S8 669 aa18.83■□□□□ 0.6
CDH23-212ENST00000616684 TPD52L3Q96J77 140 aa18.83■□□□□ 0.6
CDH23-212ENST00000616684 COPG2Q9UBF2 871 aa18.83■□□□□ 0.6
CDH23-212ENST00000616684 ANAPC2Q9UJX6 822 aa18.83■□□□□ 0.6
CDH23-212ENST00000616684 SOX6P35712 828 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 GSSP48637 474 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 TGM3Q08188 693 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 ALYREFQ86V81 257 aaKnown RBP18.82■□□□□ 0.6
CDH23-212ENST00000616684 CLVS1Q8IUQ0 354 aaPredicted RBP18.82■□□□□ 0.6
CDH23-212ENST00000616684 DENND1CQ8IV53 801 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 CCDC103Q8IW40 242 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 CPT1BQ92523 772 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 MAGED4Q96JG8 741 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 DCUN1D5Q9BTE7 237 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 RNF208Q9H0X6 261 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 PALMDQ9NP74 551 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 SPG21Q9NZD8 308 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 FGFR3P22607 806 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 GRIA3P42263 894 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 NCF4Q15080 339 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 EML3Q32P44 896 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 SLC44A4Q53GD3 710 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 ZFP42Q96MM3 310 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 NOCTQ9UK39 431 aaKnown RBP18.82■□□□□ 0.6
CDH23-212ENST00000616684 NR2E1Q9Y466 385 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 LINC00854A0A1B0GVQ3 168 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 SMIM35A0A1B0GVV1 85 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 ZNF839A8K0R7 811 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 GPR25O00155 361 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 HNRNPLP14866 589 aaKnown RBP eCLIP18.82■□□□□ 0.6
CDH23-212ENST00000616684 KRT20P35900 424 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 CDK18Q07002 472 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 BRMS1LQ5PSV4 323 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 PPM1LQ5SGD2 360 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 STN1Q9H668 368 aaKnown RBP18.82■□□□□ 0.6
CDH23-212ENST00000616684 KLHL28Q9NXS3 571 aa18.82■□□□□ 0.6
CDH23-212ENST00000616684 TDRKHQ9Y2W6 561 aaKnown RBP18.82■□□□□ 0.6
CDH23-212ENST00000616684 FAM220BPB1ANY3 271 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 PTGES3LE9PB15 166 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 PRR23D1E9PI22 279 aaPredicted RBP18.81■□□□□ 0.6
CDH23-212ENST00000616684 PRR23D2P0DMB1 279 aaPredicted RBP18.81■□□□□ 0.6
CDH23-212ENST00000616684 AIF1P55008 147 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 GRIK3Q13003 919 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 IKBKEQ14164 716 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 SQLEQ14534 574 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 CERCAMQ5T4B2 595 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 MTSS1LQ765P7 747 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 TRIM17Q9Y577 477 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 MAFBQ9Y5Q3 323 aaPredicted RBP18.81■□□□□ 0.6
CDH23-212ENST00000616684 COL1A2P08123 1366 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 BPGMP07738 259 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 PTP4A2Q12974 167 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 USP4Q13107 963 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 AFTPHQ6ULP2 937 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 BNIPLQ7Z465 357 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 MON1AQ86VX9 555 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 BPIFA1Q9NP55 256 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 TLR5O60602 858 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 BCL10O95999 233 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 AMHP03971 560 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 C2P06681 752 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 CSH1P0DML2 217 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 CSH2P0DML3 217 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 CENPAP49450 140 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 APTXQ7Z2E3 356 aaKnown RBP18.81■□□□□ 0.6
CDH23-212ENST00000616684 TTC7BQ86TV6 843 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 CACUL1Q86Y37 369 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 RDH11Q8TC12 318 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 SMAD5Q99717 465 aaKnown RBP18.81■□□□□ 0.6
CDH23-212ENST00000616684 ZDHHC6Q9H6R6 413 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 CAB39LQ9H9S4 337 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 XPNPEP1Q9NQW7 623 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 ADPRHL2Q9NX46 363 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 PCDHGC3Q9UN70 934 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 CNTNAP1P78357 1384 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 FAM20BO75063 409 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 PTPN3P26045 913 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 TUSC3Q13454 348 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 CAMK1DQ8IU85 385 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 EFCAB3Q8N7B9 438 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 VPS45Q9NRW7 570 aa18.81■□□□□ 0.6
CDH23-212ENST00000616684 PEX10O60683 326 aa18.8■□□□□ 0.6
CDH23-212ENST00000616684 MLYCDO95822 493 aa18.8■□□□□ 0.6
CDH23-212ENST00000616684 HGFP14210 728 aa18.8■□□□□ 0.6
CDH23-212ENST00000616684 PREPLQ4J6C6 727 aaPredicted RBP18.8■□□□□ 0.6
CDH23-212ENST00000616684 TRAPPC5Q8IUR0 188 aa18.8■□□□□ 0.6
CDH23-212ENST00000616684 SETD9Q8NE22 299 aa18.8■□□□□ 0.6
CDH23-212ENST00000616684 RP9Q8TA86 221 aaKnown RBP18.8■□□□□ 0.6
CDH23-212ENST00000616684 MTFMTQ96DP5 389 aaKnown RBP18.8■□□□□ 0.6
CDH23-212ENST00000616684 TSPAN18Q96SJ8 248 aa18.8■□□□□ 0.6
CDH23-212ENST00000616684 RHOJQ9H4E5 214 aa18.8■□□□□ 0.6
CDH23-212ENST00000616684 DDX18Q9NVP1 670 aaKnown RBP18.8■□□□□ 0.6
CDH23-212ENST00000616684 A0A087WXM4 84 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms