RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 SLC20A2Q08357 652 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 FILIP1LQ4L180 1135 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 SEL1L3Q68CR1 1132 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 GCNT7Q6ZNI0 430 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 STRADAQ7RTN6 431 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 ABI3BPQ7Z7G0 1075 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 PCDH20Q8N6Y1 951 aaKnown RBP19.31■□□□□ 0.68
CDX1-202ENST00000616154 EMC1Q8N766 993 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 DCBLD1Q8N8Z6 715 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 FAM174AQ8TBP5 190 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 IFT43Q96FT9 208 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 CRELD1Q96HD1 420 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 SPON2Q9BUD6 331 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 ATP13A1Q9HD20 1204 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 UCKL1Q9NWZ5 548 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 ADAM22Q9P0K1 906 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 PPARGC1AQ9UBK2 798 aaKnown RBP19.31■□□□□ 0.68
CDX1-202ENST00000616154 CLCA2Q9UQC9 943 aa19.31■□□□□ 0.68
CDX1-202ENST00000616154 PIAS2O75928 621 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 SERPINC1P01008 464 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 ITGB7P26010 798 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 PBX1P40424 430 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 NEK3P51956 506 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 UBASH3AP57075 661 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 ARF5P84085 180 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 DAB2P98082 770 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 GNA12Q03113 381 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 CCDC14Q49A88 953 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 HS1BP3Q53T59 392 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 FIGNQ5HY92 759 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 KIAA1161Q6NSJ0 714 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 FAM131BQ86XD5 332 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 SLC22A18ASQ8N1D0 253 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 JOSD2Q8TAC2 188 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 SNIP1Q8TAD8 396 aaKnown RBP19.3■□□□□ 0.68
CDX1-202ENST00000616154 RXFP2Q8WXD0 754 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 CALN1Q9BXU9 219 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 EDEM3Q9BZQ6 932 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 IFNKQ9P0W0 207 aa19.3■□□□□ 0.68
CDX1-202ENST00000616154 CXorf51AA0A1B0GTR3 108 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 FAM170AA1A519 330 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 A6NNZ2 444 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 GIMD1P0DJR0 217 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 ADRB3P13945 408 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 SDC4P31431 198 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 PRKCIP41743 596 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 CLDN2P57739 230 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 RPS21P63220 83 aaKnown RBP19.29■□□□□ 0.68
CDX1-202ENST00000616154 CARD16Q5EG05 197 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 PPP1R15BQ5SWA1 713 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 MANEALQ5VSG8 457 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 PPP1R2P3Q6NXS1 205 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 DCP2Q8IU60 420 aaKnown RBP19.29■□□□□ 0.68
CDX1-202ENST00000616154 HEPHQ9BQS7 1158 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 XPO4Q9C0E2 1151 aaKnown RBP19.29■□□□□ 0.68
CDX1-202ENST00000616154 RETREG1Q9H6L5 497 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 GPR27Q9NS67 375 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 AIPL1Q9NZN9 384 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 HS3ST3A1Q9Y663 406 aa19.29■□□□□ 0.68
CDX1-202ENST00000616154 SIGLEC16A6NMB1 481 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 FFAR2O15552 330 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 CBFA2T2O43439 604 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 AP1G1O43747 822 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 KRT3P12035 628 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 CKMT1AP12532 417 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 ITPKBP27987 946 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 L1CAMP32004 1257 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 CCNHP51946 323 aaPredicted RBP19.28■□□□□ 0.68
CDX1-202ENST00000616154 KYAT3Q6YP21 454 aaKnown RBP19.28■□□□□ 0.68
CDX1-202ENST00000616154 LRRC69Q6ZNQ3 347 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 Q6ZSR6 202 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 ZSCAN30Q86W11 494 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 MRFAP1L1Q96HT8 127 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 VCPIP1Q96JH7 1222 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 SLC17A9Q9BYT1 436 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 NLGN3Q9NZ94 848 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 FADS3Q9Y5Q0 445 aa19.28■□□□□ 0.68
CDX1-202ENST00000616154 GCN1Q92616 2671 aaKnown RBP19.28■□□□□ 0.68
CDX1-202ENST00000616154 LRRC53A6NM62 1247 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 BRINP1O60477 761 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 MT-CO3P00414 261 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 ALPPL2P10696 532 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 RFC1P35251 1148 aaPredicted RBP19.27■□□□□ 0.68
CDX1-202ENST00000616154 ADRA1BP35368 520 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 ETFBP38117 255 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 HDAC4P56524 1084 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 ATP11AP98196 1134 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 FGL2Q14314 439 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 C15orf59Q2T9L4 293 aaPredicted RBP19.27■□□□□ 0.68
CDX1-202ENST00000616154 ACAD10Q6JQN1 1059 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 PTAR1Q7Z6K3 402 aaPredicted RBP19.27■□□□□ 0.68
CDX1-202ENST00000616154 PLPP6Q8IY26 295 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 DRC7Q8IY82 874 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 NTAN1Q96AB6 310 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 ISG20Q96AZ6 181 aaKnown RBP19.27■□□□□ 0.68
CDX1-202ENST00000616154 FEM1CQ96JP0 617 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 BMFQ96LC9 184 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 OSBPL2Q9H1P3 480 aa19.27■□□□□ 0.68
CDX1-202ENST00000616154 FCF1Q9Y324 198 aaKnown RBP19.27■□□□□ 0.68
CDX1-202ENST00000616154 BPTFQ12830 3046 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms