RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 COG4Q9H9E3 785 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 NMRAL1Q9HBL8 299 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 PRDM5Q9NQX1 630 aaPredicted RBP14.91□□□□□ -0.02
CDH1-213ENST00000612417 OR12D3Q9UGF7 316 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 ANKRD6Q9Y2G4 727 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 ARHGAP42A6NI28 874 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 PSMD3O43242 534 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 LRIG2O94898 1065 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 HSPA4LO95757 839 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 GALTP07902 379 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 DNAJB1P25685 340 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 DSG1Q02413 1049 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 VWA5B1Q5TIE3 1220 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 CNKSR3Q6P9H4 555 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 LINC00523Q86TU6 105 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 CRIPAKQ8N1N5 446 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 SCML4Q8N228 414 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 LRRC43Q8N309 656 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 SCAMP5Q8TAC9 235 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 EDEM1Q92611 657 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 ARMC5Q96C12 935 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 ATXN7L3BQ96GX2 97 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 TSGA13Q96PP4 275 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 NR1H4Q96RI1 486 aaPredicted RBP14.9□□□□□ -0.02
CDH1-213ENST00000612417 KIFC1Q9BW19 673 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 WDCPQ9H6R7 721 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 S100A14Q9HCY8 104 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 C20orf96Q9NUD7 363 aaPredicted RBP14.9□□□□□ -0.02
CDH1-213ENST00000612417 OXSMQ9NWU1 459 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 MARCH5Q9NX47 278 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 CDH22Q9UJ99 828 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 PPM1HQ9ULR3 514 aa14.9□□□□□ -0.02
CDH1-213ENST00000612417 EIF4E1BA6NMX2 242 aaKnown RBP14.89□□□□□ -0.03
CDH1-213ENST00000612417 ATP9BO43861 1147 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 HSPA8P11142 646 aaKnown RBP14.89□□□□□ -0.03
CDH1-213ENST00000612417 SP100P23497 879 aaPredicted RBP14.89□□□□□ -0.03
CDH1-213ENST00000612417 TUBP50607 506 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 LBX1P52954 281 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 PRKAA2P54646 552 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 IRF9Q00978 393 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 NFE2Q16621 373 aaPredicted RBP14.89□□□□□ -0.03
CDH1-213ENST00000612417 LRRC26Q2I0M4 334 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 ANO4Q32M45 955 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 ZNF280DQ6N043 979 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 FUT10Q6P4F1 479 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 TMEM175Q9BSA9 504 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 OXCT2Q9BYC2 517 aaPredicted RBP14.89□□□□□ -0.03
CDH1-213ENST00000612417 TKTL2Q9H0I9 626 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 RHOJQ9H4E5 214 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 CAB39LQ9H9S4 337 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 CHRAC1Q9NRG0 131 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 SCOCQ9UIL1 159 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 MYLKQ15746 1914 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 E2F8A0AVK6 867 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 MAGEA13PA6NCF6 341 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.89□□□□□ -0.03
CDH1-213ENST00000612417 BUD23O43709 281 aaKnown RBP14.89□□□□□ -0.03
CDH1-213ENST00000612417 NEBLO76041 1014 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 ITGAXP20702 1163 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 GLDCP23378 1020 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 ALDH7A1P49419 539 aaKnown RBP14.89□□□□□ -0.03
CDH1-213ENST00000612417 C1QTNF8P60827 252 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 COG7P83436 770 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 USP4Q13107 963 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 PRPSAP1Q14558 356 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 DLG2Q15700 870 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 RALGPS1Q5JS13 557 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 CFAP157Q5JU67 520 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 OR52E8Q6IFG1 317 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 ZC3HC1Q86WB0 502 aaKnown RBP14.89□□□□□ -0.03
CDH1-213ENST00000612417 PHTF2Q8N3S3 785 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 ECSITQ9BQ95 431 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 C1QTNF1Q9BXJ1 281 aa14.89□□□□□ -0.03
CDH1-213ENST00000612417 ZBTB14O43829 449 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 NCF2P19878 526 aaPredicted RBP14.88□□□□□ -0.03
CDH1-213ENST00000612417 NMBRP28336 390 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 ELAVL2Q12926 359 aaKnown RBP14.88□□□□□ -0.03
CDH1-213ENST00000612417 SLC9B1Q4ZJI4 515 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 SPOUT1Q5T280 376 aaKnown RBP14.88□□□□□ -0.03
CDH1-213ENST00000612417 FAM117BQ6P1L5 589 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 IZUMO2Q6UXV1 221 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 ZYG11AQ6WRX3 759 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 FRMD7Q6ZUT3 714 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 BEND5Q7L4P6 421 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 DHDDSQ86SQ9 333 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 CCDC117Q8IWD4 279 aaPredicted RBP14.88□□□□□ -0.03
CDH1-213ENST00000612417 CNTN4Q8IWV2 1026 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 TMEM151AQ8N4L1 468 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 SLC25A41Q8N5S1 370 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 DNAJC5GQ8N7S2 189 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 TDRD5Q8NAT2 981 aaKnown RBP14.88□□□□□ -0.03
CDH1-213ENST00000612417 IFT43Q96FT9 208 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 CNDP1Q96KN2 507 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 TTC1Q99614 292 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 RTKNQ9BST9 563 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 GATA5Q9BWX5 397 aaPredicted RBP14.88□□□□□ -0.03
CDH1-213ENST00000612417 DRC3Q9H069 523 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 OSBPL2Q9H1P3 480 aa14.88□□□□□ -0.03
CDH1-213ENST00000612417 IARS2Q9NSE4 1012 aaKnown RBP14.88□□□□□ -0.03
CDH1-213ENST00000612417 DLGAP2Q9P1A6 1054 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms