RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 ACSM2BQ68CK6 577 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 TRMT11Q7Z4G4 463 aaKnown RBP12.51□□□□□ -0.41
HLCS-207ENST00000612277 PM20D2Q8IYS1 436 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 TOP1MTQ969P6 601 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 RUSC1Q9BVN2 902 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 NOL11Q9H8H0 719 aaKnown RBP12.51□□□□□ -0.41
HLCS-207ENST00000612277 IFT46Q9NQC8 304 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 STARD7Q9NQZ5 370 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 GPATCH2LQ9NWQ4 482 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 RAB26Q9ULW5 256 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 PSMD13Q9UNM6 376 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 NCAM2O15394 837 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 FDPSP14324 419 aaKnown RBP12.51□□□□□ -0.41
HLCS-207ENST00000612277 HOXB6P17509 224 aaKnown RBP12.51□□□□□ -0.41
HLCS-207ENST00000612277 RHOAP61586 193 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 FAAP100Q0VG06 881 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 CYP2A13Q16696 494 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 GCNT7Q6ZNI0 430 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 FAM47BQ8NA70 645 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 KAT5Q92993 513 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 TMEM159Q96B96 161 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 RAB23Q9ULC3 237 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 PRKAB1Q9Y478 270 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 UMODL1Q5DID0 1318 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 ARL5CA6NH57 179 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 SRRM3A6NNA2 597 aaPredicted RBP12.51□□□□□ -0.41
HLCS-207ENST00000612277 CLDN25C9JDP6 229 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 KBTBD13C9JR72 458 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 BTN3A1O00481 513 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 KCNA6P17658 529 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 NELFEP18615 380 aaKnown RBP12.51□□□□□ -0.41
HLCS-207ENST00000612277 RBM34P42696 430 aaKnown RBP12.51□□□□□ -0.41
HLCS-207ENST00000612277 PITPNAQ00169 270 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 CDYL2Q8N8U2 506 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 OR2L3Q8NG85 312 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 NEDD1Q8NHV4 660 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 SNIP1Q8TAD8 396 aaKnown RBP12.51□□□□□ -0.41
HLCS-207ENST00000612277 ZNF398Q8TD17 642 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 TEFMQ96QE5 360 aaKnown RBP12.51□□□□□ -0.41
HLCS-207ENST00000612277 SENP2Q9HC62 589 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 GDF3Q9NR23 364 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 DPP3Q9NY33 737 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 TDRKHQ9Y2W6 561 aaKnown RBP12.51□□□□□ -0.41
HLCS-207ENST00000612277 TRDMT1O14717 391 aaKnown RBP12.51□□□□□ -0.41
HLCS-207ENST00000612277 OR56A5P0C7T3 313 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 ZNF7P17097 686 aaPredicted RBP12.51□□□□□ -0.41
HLCS-207ENST00000612277 CHST15Q7LFX5 561 aaPredicted RBP12.51□□□□□ -0.41
HLCS-207ENST00000612277 MPP5Q8N3R9 675 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 OR6J1Q8NGC5 347 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 AENQ8WTP8 325 aaKnown RBP12.51□□□□□ -0.41
HLCS-207ENST00000612277 TATDN2Q93075 761 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 FCRL4Q96PJ5 515 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 PRDM4Q9UKN5 801 aa12.51□□□□□ -0.41
HLCS-207ENST00000612277 SNX3O60493 162 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 TSPAN1O60635 241 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 SLC25A12O75746 678 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 FGFR1P11362 822 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 ADRA1DP25100 572 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 PON1P27169 355 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 CXorf57Q6NSI4 855 aaKnown RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 INO80EQ8NBZ0 244 aaPredicted RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 CCDC54Q8NEL0 328 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 ZFP28Q8NHY6 868 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 COA1Q9GZY4 146 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 CATSPERZQ9NTU4 200 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 FAM237BA0A1B0GVD1 139 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 PPP1R3GB7ZBB8 358 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 TBX3O15119 743 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 OGTO15294 1046 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 ACAT1P24752 427 aaKnown RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 MGAT1P26572 445 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 PGDP52209 483 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 GPSM2P81274 684 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 POU6F1Q14863 301 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 CDKL4Q5MAI5 379 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 HAGHLQ6PII5 290 aaPredicted RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 GPER1Q99527 375 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 PRPF19Q9UMS4 504 aaKnown RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 AP5Z1O43299 807 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 PROSCO94903 275 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 TFRCP02786 760 aaKnown RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 ODC1P11926 461 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 HSD3B1P14060 373 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 NFKB1P19838 968 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 MAGEA6P43360 314 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 CRKLP46109 303 aaKnown RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 RPL21P46778 160 aaKnown RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 GDI2P50395 445 aaKnown RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 ECT2LQ008S8 904 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 VMACQ2NL98 169 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 LACTB2Q53H82 288 aaPredicted RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 C6orf183Q5T699 404 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 GARNL3Q5VVW2 1013 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 MFSD14CQ5VZR4 134 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 RNF31Q96EP0 1072 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 MGME1Q9BQP7 344 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 SNX6Q9UNH7 406 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 TNPO3Q9Y5L0 923 aaKnown RBP12.5□□□□□ -0.41
HLCS-207ENST00000612277 SH3D21A4FU49 640 aa12.5□□□□□ -0.41
HLCS-207ENST00000612277 TP73O15350 636 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms