RNA–Protein interactions for RNA: ENST00000610538.4

TP53-219, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-219ENST00000610538 RFXAPO00287 272 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 LEFTY2O00292 366 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 BUD23O43709 281 aaKnown RBP12.49□□□□□ -0.41
TP53-219ENST00000610538 CLASP2O75122 1294 aaKnown RBP12.49□□□□□ -0.41
TP53-219ENST00000610538 MT-CO1P00395 513 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 CDC25CP30307 473 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 GMPRP36959 345 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 GEMP55040 296 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 CDH18Q13634 790 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 POTEHQ6S545 545 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 TMC5Q6UXY8 1006 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 RANBP10Q6VN20 620 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 TDRD5Q8NAT2 981 aaKnown RBP12.49□□□□□ -0.41
TP53-219ENST00000610538 ATXN2LQ8WWM7 1075 aaKnown RBP12.49□□□□□ -0.41
TP53-219ENST00000610538 IMP4Q96G21 291 aaKnown RBP12.49□□□□□ -0.41
TP53-219ENST00000610538 SLC13A1Q9BZW2 595 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 MAGEH1Q9H213 219 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 ZFATQ9P243 1243 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 VPS28Q9UK41 221 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 MAFFQ9ULX9 164 aa12.49□□□□□ -0.41
TP53-219ENST00000610538 ZCWPW2A0A1B0GU75 182 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 HMX2A2RU54 273 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 FAM159BA6NKW6 160 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 CCL22O00626 93 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 TOP3BO95985 862 aaKnown RBP12.48□□□□□ -0.41
TP53-219ENST00000610538 TSHRP16473 764 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 PTPN2P17706 415 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 PGGT1BP53609 377 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 ACBD5Q5T8D3 534 aaPredicted RBP12.48□□□□□ -0.41
TP53-219ENST00000610538 ESRP1Q6NXG1 681 aaKnown RBP12.48□□□□□ -0.41
TP53-219ENST00000610538 LINC00523Q86TU6 105 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 ARRDC2Q8TBH0 407 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 MZB1Q8WU39 189 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 NSMCE3Q96MG7 304 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 SMIM14Q96QK8 99 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 TGS1Q96RS0 853 aaKnown RBP12.48□□□□□ -0.41
TP53-219ENST00000610538 IL22Q9GZX6 179 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 LINC00597Q9H2U6 94 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 PDFQ9HBH1 243 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 C20orf96Q9NUD7 363 aaPredicted RBP12.48□□□□□ -0.41
TP53-219ENST00000610538 LSM7Q9UK45 103 aaKnown RBP12.48□□□□□ -0.41
TP53-219ENST00000610538 WDR91A4D1P6 747 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 K7ERQ8 282 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 NDUFAB1O14561 156 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 ADRA1AP35348 466 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 GALNT3Q14435 633 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 CNGA3Q16281 694 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 Q6ZNB5 142 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 TMEM135Q86UB9 458 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 RASSF3Q86WH2 238 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 MFN1Q8IWA4 741 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 CMTM8Q8IZV2 173 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 APCDD1Q8J025 514 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 TEX26Q8N6G2 289 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.48□□□□□ -0.41
TP53-219ENST00000610538 CERS2Q96G23 380 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 FEM1AQ9BSK4 669 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 NOD2Q9HC29 1040 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 NKIRAS1Q9NYS0 192 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 UBA2Q9UBT2 640 aaPredicted RBP12.48□□□□□ -0.41
TP53-219ENST00000610538 TBC1D30Q9Y2I9 924 aa12.48□□□□□ -0.41
TP53-219ENST00000610538 NOTCH4Q99466 2003 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 A0A0U1RQS6 177 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 IQANK1A0A1B0GTG1 560 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 ILVBLA1L0T0 632 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 FAM47DPA6NHR8 397 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 MOSPD3O75425 235 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 VAPBO95292 243 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 PRAMEF12O95522 483 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 GBP2P32456 591 aaPredicted RBP12.47□□□□□ -0.41
TP53-219ENST00000610538 CSKP41240 450 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 NPY2RP49146 381 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 WDR4P57081 412 aaKnown RBP12.47□□□□□ -0.41
TP53-219ENST00000610538 MTA1Q13330 715 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 SLC1A5Q15758 541 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 STEAP4Q687X5 459 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 KDELC1Q6UW63 502 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 EFCAB3Q8N7B9 438 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 OR6K2Q8NGY2 324 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 GDPD5Q8WTR4 605 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 PDCD6IPQ8WUM4 868 aaKnown RBP12.47□□□□□ -0.41
TP53-219ENST00000610538 GLMNQ92990 594 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 CCT8L2Q96SF2 557 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 POLR1EQ9GZS1 481 aaKnown RBP12.47□□□□□ -0.41
TP53-219ENST00000610538 EPN3Q9H201 632 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 IGFLR1Q9H665 355 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 SLC17A7Q9P2U7 560 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 GMNCA6NCL1 334 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 C5orf67F2Z3F1 127 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 KDELR3O43731 214 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 ZNF189O75820 626 aaPredicted RBP12.47□□□□□ -0.41
TP53-219ENST00000610538 ALDH1A2O94788 518 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 VIMP08670 466 aaKnown RBP12.47□□□□□ -0.41
TP53-219ENST00000610538 NRIP1P48552 1158 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 SLC7A9P82251 487 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 ARF5P84085 180 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 CBLBQ13191 982 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 PTPRCAPQ14761 206 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 PTPRRQ15256 657 aa12.47□□□□□ -0.41
TP53-219ENST00000610538 TMEM25Q86YD3 366 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms