RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 MAXP61244 160 aa28.39■■■□□ 2.14
CSPG5-205ENST00000610462 IL10RBQ08334 325 aa28.39■■■□□ 2.14
CSPG5-205ENST00000610462 USP10Q14694 798 aaKnown RBP28.39■■■□□ 2.14
CSPG5-205ENST00000610462 POLD3Q15054 466 aaPredicted RBP28.39■■■□□ 2.14
CSPG5-205ENST00000610462 CNGA3Q16281 694 aa28.39■■■□□ 2.14
CSPG5-205ENST00000610462 PARP15Q460N3 678 aa28.39■■■□□ 2.14
CSPG5-205ENST00000610462 NADSYN1Q6IA69 706 aa28.39■■■□□ 2.14
CSPG5-205ENST00000610462 RAPH1Q70E73 1250 aa28.39■■■□□ 2.14
CSPG5-205ENST00000610462 ZNF354CQ86Y25 554 aa28.39■■■□□ 2.14
CSPG5-205ENST00000610462 FBXO22Q8NEZ5 403 aa28.39■■■□□ 2.14
CSPG5-205ENST00000610462 BTBD10Q9BSF8 475 aa28.39■■■□□ 2.14
CSPG5-205ENST00000610462 STN1Q9H668 368 aaKnown RBP28.39■■■□□ 2.14
CSPG5-205ENST00000610462 PQBP1O60828 265 aaKnown RBP28.39■■■□□ 2.13
CSPG5-205ENST00000610462 CD86P42081 329 aa28.39■■■□□ 2.13
CSPG5-205ENST00000610462 THOC5Q13769 683 aaKnown RBP28.39■■■□□ 2.13
CSPG5-205ENST00000610462 SEPT6Q14141 434 aa28.39■■■□□ 2.13
CSPG5-205ENST00000610462 DENND6AQ8IWF6 608 aa28.39■■■□□ 2.13
CSPG5-205ENST00000610462 SLC25A41Q8N5S1 370 aa28.39■■■□□ 2.13
CSPG5-205ENST00000610462 RANBP9Q96S59 729 aa28.39■■■□□ 2.13
CSPG5-205ENST00000610462 ARMCX1Q9P291 453 aa28.39■■■□□ 2.13
CSPG5-205ENST00000610462 MID2Q9UJV3 735 aa28.39■■■□□ 2.13
CSPG5-205ENST00000610462 CAPN14A8MX76 684 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 APOA4P06727 396 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 MMP2P08253 660 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 ESRRAP11474 423 aaPredicted RBP28.38■■■□□ 2.13
CSPG5-205ENST00000610462 MAPKAPK2P49137 400 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 YBEYP58557 167 aaPredicted RBP28.38■■■□□ 2.13
CSPG5-205ENST00000610462 MPP1Q00013 466 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 CTBP1Q13363 440 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 ATG14Q6ZNE5 492 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 LCA5Q86VQ0 697 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 CIR1Q86X95 450 aaPredicted RBP28.38■■■□□ 2.13
CSPG5-205ENST00000610462 RILPQ96NA2 401 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 C1QTNF1Q9BXJ1 281 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 HEATR9A2RTY3 570 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 CXCL10P02778 98 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 TACR2P21452 398 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 DSC2Q02487 901 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 SERINC3Q13530 473 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 AGAP11Q8TF27 550 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 SREK1Q8WXA9 508 aaKnown RBP28.38■■■□□ 2.13
CSPG5-205ENST00000610462 MIPEPQ99797 713 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 EBF4Q9BQW3 602 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 FAM167BQ9BTA0 163 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 FAM96AQ9H5X1 160 aa28.38■■■□□ 2.13
CSPG5-205ENST00000610462 MICAL3Q7RTP6 2002 aa28.37■■■□□ 2.13
CSPG5-205ENST00000610462 DNAJB1P25685 340 aa28.37■■■□□ 2.13
CSPG5-205ENST00000610462 ARRB2P32121 409 aa28.37■■■□□ 2.13
CSPG5-205ENST00000610462 SERPINH1P50454 418 aaKnown RBP28.37■■■□□ 2.13
CSPG5-205ENST00000610462 SLC41A1Q8IVJ1 513 aa28.37■■■□□ 2.13
CSPG5-205ENST00000610462 C2CD4AQ8NCU7 369 aaPredicted RBP28.37■■■□□ 2.13
CSPG5-205ENST00000610462 FAM13CQ8NE31 585 aa28.37■■■□□ 2.13
CSPG5-205ENST00000610462 CEP295NLQ96MC4 621 aa28.37■■■□□ 2.13
CSPG5-205ENST00000610462 TSNARE1Q96NA8 513 aa28.37■■■□□ 2.13
CSPG5-205ENST00000610462 CDK5RAP1Q96SZ6 601 aaKnown RBP28.37■■■□□ 2.13
CSPG5-205ENST00000610462 MTRRQ9UBK8 725 aa28.37■■■□□ 2.13
CSPG5-205ENST00000610462 ADAM12O43184 909 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 SERPINA6P08185 405 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 OR1E1P30953 314 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 SLC12A1Q13621 1099 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 SLC8B1Q6J4K2 584 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 RDH11Q8TC12 318 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 TADA1Q96BN2 335 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 MYEOVQ96EZ4 313 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 PNPOQ9NVS9 261 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 PCDHB12Q9Y5F1 795 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 H2AFYO75367 372 aaKnown RBP28.36■■■□□ 2.13
CSPG5-205ENST00000610462 EFEMP2O95967 443 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 COL6A2P12110 1019 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 SAT1P21673 171 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 CCND1P24385 295 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 SLC1A2P43004 574 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 PGBD5Q8N414 524 aa28.36■■■□□ 2.13
CSPG5-205ENST00000610462 CADM1Q9BY67 442 aaKnown RBP28.36■■■□□ 2.13
CSPG5-205ENST00000610462 TMEM114B3SHH9 223 aa28.35■■■□□ 2.13
CSPG5-205ENST00000610462 PHGDHO43175 533 aaKnown RBP28.35■■■□□ 2.13
CSPG5-205ENST00000610462 TRIM13O60858 407 aa28.35■■■□□ 2.13
CSPG5-205ENST00000610462 SLC35E2BP0CK96 405 aa28.35■■■□□ 2.13
CSPG5-205ENST00000610462 ALOX15P16050 662 aaPredicted RBP28.35■■■□□ 2.13
CSPG5-205ENST00000610462 KCNQ1P51787 676 aa28.35■■■□□ 2.13
CSPG5-205ENST00000610462 CCL23P55773 120 aa28.35■■■□□ 2.13
CSPG5-205ENST00000610462 ARRDC2Q8TBH0 407 aa28.35■■■□□ 2.13
CSPG5-205ENST00000610462 TASP1Q9H6P5 420 aa28.35■■■□□ 2.13
CSPG5-205ENST00000610462 DNMT3LQ9UJW3 386 aa28.35■■■□□ 2.13
CSPG5-205ENST00000610462 CHD5Q8TDI0 1954 aa28.35■■■□□ 2.13
CSPG5-205ENST00000610462 FAM95CA0A1B0GW59 222 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 MSLNQ13421 630 aaPredicted RBP28.34■■■□□ 2.13
CSPG5-205ENST00000610462 TUBB3Q13509 450 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 IHHQ14623 411 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 LBRQ14739 615 aaKnown RBP28.34■■■□□ 2.13
CSPG5-205ENST00000610462 TBCCQ15814 346 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 USP41Q3LFD5 358 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 C5orf22Q49AR2 442 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 TSTD2Q5T7W7 516 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 SNX30Q5VWJ9 437 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 RINLQ6ZS11 566 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 TREML1Q86YW5 311 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 CCDC106Q9BWC9 280 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 HIPK3Q9H422 1215 aa28.34■■■□□ 2.13
CSPG5-205ENST00000610462 DNAJC28Q9NX36 388 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms