RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 KCNU1A8MYU2 1149 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 E7ENX8 843 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 ATP5F1P24539 256 aaPredicted RBP22.63■■□□□ 1.21
SHANK2-220ENST00000608988 ADORA2BP29275 332 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 ACADVLP49748 655 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 SCNN1BP51168 640 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 GTF2A2P52657 109 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 RAB10P61026 200 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 SCAPQ12770 1279 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 REP15Q6BDI9 236 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 APOBEC3FQ8IUX4 373 aaKnown RBP22.63■■□□□ 1.21
SHANK2-220ENST00000608988 FIBCD1Q8N539 461 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 ACVR1CQ8NER5 493 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 GPR78Q96P69 363 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 SPATC1LQ9H0A9 340 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 UPF3AQ9H1J1 476 aaKnown RBP22.63■■□□□ 1.21
SHANK2-220ENST00000608988 MEAF6Q9HAF1 191 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 XPR1Q9UBH6 696 aa22.63■■□□□ 1.21
SHANK2-220ENST00000608988 KCNK1O00180 336 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 ZBTB24O43167 697 aaPredicted RBP22.62■■□□□ 1.21
SHANK2-220ENST00000608988 C7P10643 843 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 CCR10P46092 362 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 TKTL1P51854 596 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 ZBTB6Q15916 424 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 NHSL2Q5HYW2 709 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 INTS11Q5TA45 600 aaKnown RBP22.62■■□□□ 1.21
SHANK2-220ENST00000608988 C8orf82Q6P1X6 216 aaPredicted RBP22.62■■□□□ 1.21
SHANK2-220ENST00000608988 GK5Q6ZS86 529 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 EEPD1Q7L9B9 569 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 CCDC117Q8IWD4 279 aaPredicted RBP22.62■■□□□ 1.21
SHANK2-220ENST00000608988 WNT8BQ93098 351 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 ZUFSPQ96AP4 578 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 SLCO4A1Q96BD0 722 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 KLRG1Q96E93 195 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 SLC2A13Q96QE2 648 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 RANBP9Q96S59 729 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 TCF12Q99081 682 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 TMEM181Q9P2C4 612 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 CNOT6Q9ULM6 557 aaKnown RBP22.62■■□□□ 1.21
SHANK2-220ENST00000608988 HES2Q9Y543 173 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 TRIM64A6NGJ6 449 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 PSMD12O00232 456 aaPredicted RBP22.62■■□□□ 1.21
SHANK2-220ENST00000608988 USP12O75317 370 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 SRP72O76094 671 aaKnown RBP22.62■■□□□ 1.21
SHANK2-220ENST00000608988 JUNP05412 331 aaKnown RBP22.62■■□□□ 1.21
SHANK2-220ENST00000608988 FASTKQ14296 549 aaKnown RBP22.62■■□□□ 1.21
SHANK2-220ENST00000608988 DGKDQ16760 1214 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 ZBTB49Q6ZSB9 765 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 SMYD1Q8NB12 490 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 ZNF420Q8TAQ5 688 aaPredicted RBP22.62■■□□□ 1.21
SHANK2-220ENST00000608988 ZSCAN18Q8TBC5 510 aaPredicted RBP22.62■■□□□ 1.21
SHANK2-220ENST00000608988 TFAP2CQ92754 450 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 MARK4Q96L34 752 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 SNX27Q96L92 541 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 TRIM15Q9C019 465 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 DPEP3Q9H4B8 488 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 CHRAC1Q9NRG0 131 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 AKT3Q9Y243 479 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 SNX13Q9Y5W8 968 aa22.62■■□□□ 1.21
SHANK2-220ENST00000608988 MYO18AQ92614 2054 aaKnown RBP22.61■■□□□ 1.21
SHANK2-220ENST00000608988 PHGDHO43175 533 aaKnown RBP22.61■■□□□ 1.21
SHANK2-220ENST00000608988 CBFA2T3O75081 653 aa22.61■■□□□ 1.21
SHANK2-220ENST00000608988 HNRNPCP07910 306 aaKnown RBP eCLIP22.61■■□□□ 1.215e-6■■■□□ 15.9
SHANK2-220ENST00000608988 SNRPB2P08579 225 aaKnown RBP22.61■■□□□ 1.21
SHANK2-220ENST00000608988 STMN1P16949 149 aa22.61■■□□□ 1.21
SHANK2-220ENST00000608988 ERCC2P18074 760 aa22.61■■□□□ 1.21
SHANK2-220ENST00000608988 TCN1P20061 433 aaPredicted RBP22.61■■□□□ 1.21
SHANK2-220ENST00000608988 NMBRP28336 390 aa22.61■■□□□ 1.21
SHANK2-220ENST00000608988 CD68P34810 354 aaPredicted RBP22.61■■□□□ 1.21
SHANK2-220ENST00000608988 ABCG1P45844 678 aa22.61■■□□□ 1.21
SHANK2-220ENST00000608988 ZNF33AQ06730 810 aa22.61■■□□□ 1.21
SHANK2-220ENST00000608988 GALNT1Q10472 559 aaPredicted RBP22.61■■□□□ 1.21
SHANK2-220ENST00000608988 SEMA3BQ13214 749 aa22.61■■□□□ 1.21
SHANK2-220ENST00000608988 SPIDRQ14159 915 aa22.61■■□□□ 1.21
SHANK2-220ENST00000608988 DCAF6Q58WW2 860 aa22.61■■□□□ 1.21
SHANK2-220ENST00000608988 MTX3Q5HYI7 312 aa22.61■■□□□ 1.21
SHANK2-220ENST00000608988 FAM43BQ6ZT52 329 aaPredicted RBP22.61■■□□□ 1.21
SHANK2-220ENST00000608988 COLGALT2Q8IYK4 626 aa22.61■■□□□ 1.21
SHANK2-220ENST00000608988 SPPL2BQ8TCT7 592 aa22.61■■□□□ 1.21
SHANK2-220ENST00000608988 ABTB1Q969K4 478 aaPredicted RBP22.61■■□□□ 1.21
SHANK2-220ENST00000608988 ROPN1LQ96C74 230 aa22.61■■□□□ 1.21
SHANK2-220ENST00000608988 CROTQ9UKG9 612 aa22.61■■□□□ 1.21
SHANK2-220ENST00000608988 INSRRP14616 1297 aa22.6■■□□□ 1.21
SHANK2-220ENST00000608988 MYF6P23409 242 aa22.6■■□□□ 1.21
SHANK2-220ENST00000608988 YY1P25490 414 aa22.6■■□□□ 1.21
SHANK2-220ENST00000608988 GNL1P36915 607 aaPredicted RBP22.6■■□□□ 1.21
SHANK2-220ENST00000608988 NDST2P52849 883 aa22.6■■□□□ 1.21
SHANK2-220ENST00000608988 ATXN3P54252 364 aaPredicted RBP22.6■■□□□ 1.21
SHANK2-220ENST00000608988 GALNT2Q10471 571 aa22.6■■□□□ 1.21
SHANK2-220ENST00000608988 OLIG2Q13516 323 aa22.6■■□□□ 1.21
SHANK2-220ENST00000608988 SPATS1Q496A3 300 aa22.6■■□□□ 1.21
SHANK2-220ENST00000608988 TREML2Q5T2D2 321 aa22.6■■□□□ 1.21
SHANK2-220ENST00000608988 TSTD2Q5T7W7 516 aa22.6■■□□□ 1.21
SHANK2-220ENST00000608988 TRIM67Q6ZTA4 783 aa22.6■■□□□ 1.21
SHANK2-220ENST00000608988 ERMP1Q7Z2K6 904 aa22.6■■□□□ 1.21
SHANK2-220ENST00000608988 PATL1Q86TB9 770 aaKnown RBP22.6■■□□□ 1.21
SHANK2-220ENST00000608988 ERO1BQ86YB8 467 aa22.6■■□□□ 1.21
SHANK2-220ENST00000608988 PCDH20Q8N6Y1 951 aaKnown RBP22.6■■□□□ 1.21
SHANK2-220ENST00000608988 CCNYL1Q8N7R7 359 aa22.6■■□□□ 1.21
SHANK2-220ENST00000608988 PTCD2Q8WV60 388 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms