RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 MAPK8IP2Q13387 824 aaPredicted RBP14.72□□□□□ -0.05
HDDC2-204ENST00000608295 SLC18A3Q16572 532 aa14.72□□□□□ -0.05
HDDC2-204ENST00000608295 PARP15Q460N3 678 aa14.72□□□□□ -0.05
HDDC2-204ENST00000608295 ZFYVE27Q5T4F4 411 aa14.72□□□□□ -0.05
HDDC2-204ENST00000608295 FBXL19Q6PCT2 694 aa14.72□□□□□ -0.05
HDDC2-204ENST00000608295 ARHGAP12Q8IWW6 846 aa14.72□□□□□ -0.05
HDDC2-204ENST00000608295 UMODL1-AS1Q8N2C9 162 aa14.72□□□□□ -0.05
HDDC2-204ENST00000608295 TMIEQ8NEW7 156 aa14.72□□□□□ -0.05
HDDC2-204ENST00000608295 SETD7Q8WTS6 366 aaKnown RBP14.72□□□□□ -0.05
HDDC2-204ENST00000608295 GDAP1L1Q96MZ0 367 aa14.72□□□□□ -0.05
HDDC2-204ENST00000608295 CAAP1Q9H8G2 361 aa14.72□□□□□ -0.05
HDDC2-204ENST00000608295 ETNK2Q9NVF9 386 aa14.72□□□□□ -0.05
HDDC2-204ENST00000608295 LHX3Q9UBR4 397 aa14.72□□□□□ -0.05
HDDC2-204ENST00000608295 GOLGA8CPA6NN73 597 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 WASH4PA8MWX3 477 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 H0Y8X5 98 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 MYO1FO00160 1098 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 SLC7A4O43246 635 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 GJB3O75712 270 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 MAP3K6O95382 1288 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 CD48P09326 243 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 H2AFZP0C0S5 128 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 ADRB3P13945 408 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 CD59P13987 128 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 SPINK2P20155 84 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 ITGB7P26010 798 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 HNRNPH3P31942 346 aaKnown RBP14.71□□□□□ -0.05
HDDC2-204ENST00000608295 PCK1P35558 622 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 ABL2P42684 1182 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 CCR5P51681 352 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 CDH6P55285 790 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 YBEYP58557 167 aaPredicted RBP14.71□□□□□ -0.05
HDDC2-204ENST00000608295 SNRPD1P62314 119 aaKnown RBP14.71□□□□□ -0.05
HDDC2-204ENST00000608295 RACK1P63244 317 aaKnown RBP14.71□□□□□ -0.05
HDDC2-204ENST00000608295 SLC25A11Q02978 314 aaKnown RBP14.71□□□□□ -0.05
HDDC2-204ENST00000608295 DPYSQ14117 519 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 PIGHQ14442 188 aaPredicted RBP14.71□□□□□ -0.05
HDDC2-204ENST00000608295 ATP13A4Q4VNC1 1196 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 KDM7AQ6ZMT4 941 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 H2AFVQ71UI9 128 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 PRPF39Q86UA1 669 aaKnown RBP14.71□□□□□ -0.05
HDDC2-204ENST00000608295 NAXDQ8IW45 347 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 CCDC42Q96M95 316 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 KLHL32Q96NJ5 620 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 LRRC19Q9H756 370 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 NHEJ1Q9H9Q4 299 aaPredicted RBP14.71□□□□□ -0.05
HDDC2-204ENST00000608295 PDFQ9HBH1 243 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 PCDH18Q9HCL0 1135 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 TM7SF3Q9NS93 570 aa14.71□□□□□ -0.05
HDDC2-204ENST00000608295 ZSCAN5CA6NGD5 496 aaPredicted RBP14.7□□□□□ -0.06
HDDC2-204ENST00000608295 ARHGAP42A6NI28 874 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 AKR1B15C9JRZ8 316 aaPredicted RBP14.7□□□□□ -0.06
HDDC2-204ENST00000608295 NEMP1O14524 444 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 TOP3BO95985 862 aaKnown RBP14.7□□□□□ -0.06
HDDC2-204ENST00000608295 GSRP00390 522 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 PRKCGP05129 697 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 ADRB1P08588 477 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 TNNT1P13805 278 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 ITIH2P19823 946 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 CD38P28907 300 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 RGRP47804 291 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 CLDN2P57739 230 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 SIM1P81133 766 aaPredicted RBP14.7□□□□□ -0.06
HDDC2-204ENST00000608295 SEMG2Q02383 582 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 MESDQ14696 234 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 CYTH1Q15438 398 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 DPYSL2Q16555 572 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 CCDC157Q569K6 752 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 NAPEPLDQ6IQ20 393 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 TMCO3Q6UWJ1 677 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 GAS2L3Q86XJ1 694 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 GATAD2AQ86YP4 633 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 PAF1Q8N7H5 531 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 LRRN4Q8WUT4 740 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 FAM131CQ96AQ9 280 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 CSPG4P5Q96PW8 444 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 ZDHHC5Q9C0B5 715 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 SLC32A1Q9H598 525 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 PREBQ9HCU5 417 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 DNAAF2Q9NVR5 837 aaKnown RBP14.7□□□□□ -0.06
HDDC2-204ENST00000608295 TFR2Q9UP52 801 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 ZFR2Q9UPR6 939 aaKnown RBP14.7□□□□□ -0.06
HDDC2-204ENST00000608295 BTBD3Q9Y2F9 522 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 LRRK1Q38SD2 2015 aa14.7□□□□□ -0.06
HDDC2-204ENST00000608295 TDRD6O60522 2096 aaKnown RBP14.69□□□□□ -0.06
HDDC2-204ENST00000608295 SSU72P8A0A1W2PR75 194 aa14.69□□□□□ -0.06
HDDC2-204ENST00000608295 TTC24A2A3L6 582 aaPredicted RBP14.69□□□□□ -0.06
HDDC2-204ENST00000608295 C16orf96A6NNT2 1141 aa14.69□□□□□ -0.06
HDDC2-204ENST00000608295 LATO43561 262 aa14.69□□□□□ -0.06
HDDC2-204ENST00000608295 PRAMEF11O60813 436 aa14.69□□□□□ -0.06
HDDC2-204ENST00000608295 HTR7P34969 479 aa14.69□□□□□ -0.06
HDDC2-204ENST00000608295 CTSKP43235 329 aa14.69□□□□□ -0.06
HDDC2-204ENST00000608295 NDST2P52849 883 aa14.69□□□□□ -0.06
HDDC2-204ENST00000608295 TAS2R40P59535 323 aa14.69□□□□□ -0.06
HDDC2-204ENST00000608295 ASTE1Q2TB18 679 aaPredicted RBP14.69□□□□□ -0.06
HDDC2-204ENST00000608295 MYLK3Q32MK0 819 aa14.69□□□□□ -0.06
HDDC2-204ENST00000608295 SETMARQ53H47 684 aaPredicted RBP14.69□□□□□ -0.06
HDDC2-204ENST00000608295 GDPD4Q6W3E5 623 aa14.69□□□□□ -0.06
HDDC2-204ENST00000608295 POLNQ7Z5Q5 900 aa14.69□□□□□ -0.06
HDDC2-204ENST00000608295 TRIM69Q86WT6 500 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms