RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SCN8AQ9UQD0 1980 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TMEM265A0A087WTH1 108 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 HEATR9A2RTY3 570 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PER2O15055 1255 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TSPAN3O60637 253 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MT-CYBP00156 380 aaPredicted RBP12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 INHBAP08476 426 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ALADP13716 330 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 GJA1P17302 382 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ADRA1DP25100 572 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SLCO1A2P46721 670 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 NRIP1P48552 1158 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SESN2P58004 480 aaPredicted RBP12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ARF5P84085 180 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SULT2A1Q06520 285 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MGAT5Q09328 741 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 NIPAL4Q0D2K0 466 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 KBTBD12Q3ZCT8 623 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 HP1BP3Q5SSJ5 553 aaPredicted RBP12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SYCP2LQ5T4T6 812 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 KCTD16Q68DU8 428 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PDPK2PQ6A1A2 396 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CASC4Q6P4E1 433 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 GPR149Q86SP6 731 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 LMNTD2Q8IXW0 634 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MPP5Q8N3R9 675 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PGBD5Q8N414 524 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CARNMT1Q8N4J0 409 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PPHLN1Q8NEY8 458 aaKnown RBP12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 IPMKQ8NFU5 416 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SPATA22Q8NHS9 363 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 GDPD5Q8WTR4 605 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SCG3Q8WXD2 468 aaKnown RBP12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 LMLNQ96KR4 655 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 FICDQ9BVA6 458 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 BCCIPQ9P287 314 aaKnown RBP eCLIP12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 VPS28Q9UK41 221 aa12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SMG5Q9UPR3 1016 aaKnown RBP12.45□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TRANK1O15050 2925 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 POC1B-GALNT4F8VUJ3 575 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CBX4O00257 560 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 NRG2O14511 850 aaPredicted RBP12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 INSIG1O15503 277 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PRPF4O43172 522 aaKnown RBP eCLIP12.44□□□□□ -0.421e-7■□□□□ 8.7
NEDD8-MDP1-203ENST00000604306 SIN3BO75182 1162 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 KRT37O76014 449 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 KRT38O76015 456 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CEBPBP17676 345 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PAMP19021 973 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CD86P42081 329 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 AP1S1P61966 158 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SLC1A5Q15758 541 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PLEKHG6Q3KR16 790 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ANKRD20A4Q4UJ75 823 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PKN3Q6P5Z2 889 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 KIAA0907Q7Z7F0 614 aaPredicted RBP12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 GALNT7Q86SF2 657 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 EXOC3L1Q86VI1 746 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ARID3BQ8IVW6 561 aaPredicted RBP12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SH2D3CQ8N5H7 860 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MZB1Q8WU39 189 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 IRF7Q92985 503 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ISG20Q96AZ6 181 aaKnown RBP12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TIFAQ96CG3 184 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CERS2Q96G23 380 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SRPK1Q96SB4 655 aaKnown RBP12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SEMA3CQ99985 751 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SPON2Q9BUD6 331 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CEP44Q9C0F1 390 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SPHK2Q9NRA0 654 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ABCB8Q9NUT2 735 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MKS1Q9NXB0 559 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 VPS51Q9UID3 782 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TCAF1Q9Y4C2 921 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 RPS6KL1Q9Y6S9 549 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MYO9BQ13459 2157 aa12.44□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 COL4A3Q01955 1670 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ZCWPW2A0A1B0GU75 182 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SMIM23A6NLE4 172 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 HOXC11O43248 304 aaPredicted RBP12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PMPCBO75439 489 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TMCC1O94876 653 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PRAMEF12O95522 483 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 NDST3O95803 873 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CD160O95971 181 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 PSMA3P25788 255 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 MDH1P40925 334 aaKnown RBP12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 HADHAP40939 763 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CSKP41240 450 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SERPINH1P50454 418 aaKnown RBP12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CSE1LP55060 971 aaKnown RBP12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 RPL26P61254 145 aaKnown RBP12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 DSC2Q02487 901 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CDK18Q07002 472 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 ITKQ08881 620 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 LMAN2Q12907 356 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 SPARCL1Q14515 664 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 TMED2Q15363 201 aa12.43□□□□□ -0.42
NEDD8-MDP1-203ENST00000604306 CYTH1Q15438 398 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms