RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 SERINC3Q13530 473 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 EIF4EBP2Q13542 120 aaPredicted RBP12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 MORC3Q14149 939 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 TAF5Q15542 800 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 TCEA2Q15560 299 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 DENND1BQ6P3S1 775 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CLEC18BQ6UXF7 455 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PARS2Q7L3T8 475 aaKnown RBP12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CLEC18CQ8NCF0 446 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 TBATAQ96M53 351 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 C1QTNF2Q9BXJ5 285 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SRRTQ9BXP5 876 aaKnown RBP12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CPEB1Q9BZB8 566 aaKnown RBP12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SLC13A1Q9BZW2 595 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CLPBQ9H078 707 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PCDHB11Q9Y5F2 797 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 HS3ST4Q9Y661 456 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 WASF2Q9Y6W5 498 aa12□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SPTBN1Q01082 2364 aaKnown RBP11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 A0A1B0GVL5 298 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 A0A1W2PQM1 296 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 E5RJQ4 531 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SLC16A3O15427 465 aaKnown RBP11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CNTN5O94779 1100 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 RHOCP08134 193 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CCKBRP32239 447 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 NOS2P35228 1153 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ACADSBP45954 432 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CDK17Q00537 523 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 DPYDQ12882 1025 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PTK2BQ14289 1009 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 FAXCQ5TGI0 409 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 BORAQ6PGQ7 559 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SMYD4Q8IYR2 804 aaPredicted RBP11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PPM1KQ8N3J5 372 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 FAM26EQ8N5C1 309 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 DCAF4L2Q8NA75 395 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 DENND6BQ8NEG7 585 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PCDH19Q8TAB3 1148 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SLC35C1Q96A29 364 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 TMEM74Q96NL1 305 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 NT5C1BQ96P26 610 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 LENG8Q96PV6 779 aaPredicted RBP11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PSMG3-AS1Q96PY0 264 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ADNPQ9H2P0 1102 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 USP25Q9UHP3 1055 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 GGT7Q9UJ14 662 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 DOLKQ9UPQ8 538 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ITM2BQ9Y287 266 aa11.99□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CREBBPQ92793 2442 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 COL27A1Q8IZC6 1860 aaPredicted RBP11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 BLACEA4D250 179 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 M0QYT0 321 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 NEMP1O14524 444 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 AP1G1O43747 822 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ADCY5O95622 1261 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 L1CAMP32004 1257 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ETV5P41161 510 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CASRP41180 1078 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ABL2P42684 1182 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 DNA2P51530 1060 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CDH4P55283 916 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 POLE2P56282 527 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PPARDQ03181 441 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 KCNAB2Q13303 367 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ERICH6BQ5W0A0 696 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 VPS36Q86VN1 386 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ZSCAN30Q86W11 494 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 DTX1Q86Y01 620 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 FSTL5Q8N475 847 aaPredicted RBP11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 STK32AQ8WU08 396 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 JPH3Q8WXH2 748 aaPredicted RBP11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 USP7Q93009 1102 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 MED15Q96RN5 788 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 THAP9Q9H5L6 903 aa11.98□□□□□ -0.49
PDLIM1P1-201ENST00000604187 A0A0D9SEW6 157 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 A0A1W2PQ27 194 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 A0A1W2PQ64 194 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 A0A1W2PQC6 194 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 C9orf172C9J069 976 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 TSPAN6O43657 245 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 PAGE1O75459 146 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ZNF821O75541 412 aaPredicted RBP11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 IGFALSP35858 605 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 MAPK10P53779 464 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 NME3Q13232 169 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ALFQ53S48 1182 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 HIST2H2BCQ6DN03 193 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 MACC1Q6ZN28 852 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 RRAGAQ7L523 313 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 TMEM110Q86TL2 294 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 CCNJLQ8IV13 435 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 DEFB106AQ8N104 65 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 Q8N9G6 341 aaPredicted RBP11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SCG3Q8WXD2 468 aaKnown RBP11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 ASB12Q8WXK4 309 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SLC2A13Q96QE2 648 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 HEPHQ9BQS7 1158 aa11.97□□□□□ -0.49
PDLIM1P1-201ENST00000604187 SIK2Q9H0K1 926 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms