RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 WASF2Q9Y6W5 498 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 DMXL1Q9Y485 3027 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 PI4KAP42356 2102 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 GON4LQ3T8J9 2241 aa11.74□□□□□ -0.53
CCDC12-209ENST00000604164 C10orf142B7Z368 130 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 TSPAN6O43657 245 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 PRAMEF11O60813 436 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 PALMO75781 387 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 PCDH8O95206 1070 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 ADRB1P08588 477 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 KRT7P08729 469 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 ADRB3P13945 408 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 AKT2P31751 481 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 MAN1A1P33908 653 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 ARHGAP25P42331 645 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 PAPOLAP51003 745 aaKnown RBP11.73□□□□□ -0.53
CCDC12-209ENST00000604164 RENBPP51606 427 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 SUOXP51687 545 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 METAP1P53582 386 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 ADKP55263 362 aaKnown RBP11.73□□□□□ -0.53
CCDC12-209ENST00000604164 RPS21P63220 83 aaKnown RBP11.73□□□□□ -0.53
CCDC12-209ENST00000604164 DPYSQ14117 519 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 CA9Q16790 459 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 SMTNL2Q2TAL5 461 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 ASTE1Q2TB18 679 aaPredicted RBP11.73□□□□□ -0.53
CCDC12-209ENST00000604164 AFMIDQ63HM1 303 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 KIAA1161Q6NSJ0 714 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 PSAPL1Q6NUJ1 521 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 CYP4V2Q6ZWL3 525 aaPredicted RBP11.73□□□□□ -0.53
CCDC12-209ENST00000604164 POLNQ7Z5Q5 900 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 HORMAD1Q86X24 394 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 LRRC49Q8IUZ0 686 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 BBS5Q8N3I7 341 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 OXR1Q8N573 874 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 MFSD2AQ8NA29 543 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 HCAR2Q8TDS4 363 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 NSMCE1Q8WV22 266 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 ARRDC3Q96B67 414 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 CPEB1Q9BZB8 566 aaKnown RBP11.73□□□□□ -0.53
CCDC12-209ENST00000604164 LUC7LQ9NQ29 371 aaKnown RBP11.73□□□□□ -0.53
CCDC12-209ENST00000604164 GDF3Q9NR23 364 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 TM7SF3Q9NS93 570 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 HAUS2Q9NVX0 235 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 CWC15Q9P013 229 aaKnown RBP11.73□□□□□ -0.53
CCDC12-209ENST00000604164 NYNRINQ9P2P1 1898 aaKnown RBP11.73□□□□□ -0.53
CCDC12-209ENST00000604164 INTUQ9ULD6 942 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 PCDHB9Q9Y5E1 797 aa11.73□□□□□ -0.53
CCDC12-209ENST00000604164 SPTBN4Q9H254 2564 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 MED19A0JLT2 244 aaPredicted RBP11.72□□□□□ -0.53
CCDC12-209ENST00000604164 DFFAO00273 331 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 PLK4O00444 970 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 NEMP1O14524 444 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 FLRT2O43155 660 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 GJB3O75712 270 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 PROSCO94903 275 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 RARAP10276 462 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 XPAP23025 273 aaPredicted RBP11.72□□□□□ -0.53
CCDC12-209ENST00000604164 IL1R2P27930 398 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 CSNK1DP48730 415 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 ARRB1P49407 418 aaPredicted RBP11.72□□□□□ -0.53
CCDC12-209ENST00000604164 CCT8P50990 548 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 PPP2CBP62714 309 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 PPP2CAP67775 309 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 SLC25A11Q02978 314 aaKnown RBP11.72□□□□□ -0.53
CCDC12-209ENST00000604164 IL10RBQ08334 325 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 TBX2Q13207 712 aaPredicted RBP11.72□□□□□ -0.53
CCDC12-209ENST00000604164 PDK2Q15119 407 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 KIF19Q2TAC6 998 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 KCNT1Q5JUK3 1230 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 CFAP58Q5T655 872 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 GDPD4Q6W3E5 623 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 LEKR1Q6ZMV7 388 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 PIP4P1Q86T03 277 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 CELF6Q96J87 481 aaKnown RBP11.72□□□□□ -0.53
CCDC12-209ENST00000604164 ZNF641Q96N77 438 aaPredicted RBP11.72□□□□□ -0.53
CCDC12-209ENST00000604164 SLC6A18Q96N87 628 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 ZNF599Q96NL3 588 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 CSPG4P5Q96PW8 444 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 TUBGCP5Q96RT8 1024 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 ORAI3Q9BRQ5 295 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 CINPQ9BW66 212 aaPredicted RBP11.72□□□□□ -0.53
CCDC12-209ENST00000604164 SLC39A8Q9C0K1 460 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 DKK3Q9UBP4 350 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 SNX11Q9Y5W9 270 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 PCDH15Q96QU1 1955 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 WDR87Q6ZQQ6 2873 aa11.72□□□□□ -0.53
CCDC12-209ENST00000604164 CHD5Q8TDI0 1954 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 A0A1W2PQU0 124 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 C16orf96A6NNT2 1141 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 TLR4O00206 839 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 PCDHGA12O60330 932 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 UGT2B4P06133 528 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 CD59P13987 128 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 HNRNPA2B1P22626 353 aaKnown RBP11.71□□□□□ -0.53
CCDC12-209ENST00000604164 MAT2AP31153 395 aaKnown RBP11.71□□□□□ -0.53
CCDC12-209ENST00000604164 HSPA9P38646 679 aaKnown RBP11.71□□□□□ -0.53
CCDC12-209ENST00000604164 CTSKP43235 329 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 CDH6P55285 790 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 TAS2R38P59533 333 aa11.71□□□□□ -0.53
CCDC12-209ENST00000604164 NSUN2Q08J23 767 aaKnown RBP eCLIP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms