RNA–Protein interactions for RNA: ENST00000603651.1

TUBE1-205, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-205ENST00000603651 GHDCQ8N2G8 530 aa5.31□□□□□ -1.56
TUBE1-205ENST00000603651 TEX45Q8NA69 505 aa5.31□□□□□ -1.56
TUBE1-205ENST00000603651 OR6Y1Q8NGX8 325 aa5.31□□□□□ -1.56
TUBE1-205ENST00000603651 TMEM163Q8TC26 289 aa5.31□□□□□ -1.56
TUBE1-205ENST00000603651 ADGRG7Q96K78 797 aa5.31□□□□□ -1.56
TUBE1-205ENST00000603651 INPP4AQ96PE3 977 aaPredicted RBP5.31□□□□□ -1.56
TUBE1-205ENST00000603651 DUX5Q96PT3 197 aa5.31□□□□□ -1.56
TUBE1-205ENST00000603651 WDR6Q9NNW5 1121 aaKnown RBP5.31□□□□□ -1.56
TUBE1-205ENST00000603651 PLCB1Q9NQ66 1216 aa5.31□□□□□ -1.56
TUBE1-205ENST00000603651 GRHL1Q9NZI5 618 aa5.31□□□□□ -1.56
TUBE1-205ENST00000603651 A0A096LPK6 155 aa5.3□□□□□ -1.56
TUBE1-205ENST00000603651 A0A1B0GVM2 712 aa5.3□□□□□ -1.56
TUBE1-205ENST00000603651 CHL1O00533 1208 aa5.3□□□□□ -1.56
TUBE1-205ENST00000603651 BUB3O43684 328 aa5.3□□□□□ -1.56
TUBE1-205ENST00000603651 KIF1CO43896 1103 aaKnown RBP5.3□□□□□ -1.56
TUBE1-205ENST00000603651 AFPP02771 609 aaKnown RBP5.3□□□□□ -1.56
TUBE1-205ENST00000603651 RPL3P39023 403 aaKnown RBP5.3□□□□□ -1.56
TUBE1-205ENST00000603651 MTNR1AP48039 350 aa5.3□□□□□ -1.56
TUBE1-205ENST00000603651 MVDP53602 400 aa5.3□□□□□ -1.56
TUBE1-205ENST00000603651 CUL4BQ13620 913 aa5.3□□□□□ -1.56
TUBE1-205ENST00000603651 THOC5Q13769 683 aaKnown RBP5.3□□□□□ -1.56
TUBE1-205ENST00000603651 SH2D4BQ5SQS7 431 aa5.3□□□□□ -1.56
TUBE1-205ENST00000603651 TMC8Q8IU68 726 aa5.3□□□□□ -1.56
TUBE1-205ENST00000603651 CACNA2D3Q8IZS8 1091 aa5.3□□□□□ -1.56
TUBE1-205ENST00000603651 RBFAQ8N0V3 343 aa5.3□□□□□ -1.56
TUBE1-205ENST00000603651 DDX23Q9BUQ8 820 aaKnown RBP5.3□□□□□ -1.56
TUBE1-205ENST00000603651 PCGF6Q9BYE7 350 aa5.3□□□□□ -1.56
TUBE1-205ENST00000603651 IL25Q9H293 177 aa5.3□□□□□ -1.56
TUBE1-205ENST00000603651 AGO1Q9UL18 857 aaKnown RBP5.3□□□□□ -1.56
TUBE1-205ENST00000603651 DYTNA2CJ06 578 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 SLC16A5O15375 505 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 HBP1O60381 514 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 METTL18O95568 372 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 GPR12P47775 334 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 GOLGA8FQ08AF8 430 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 MYBPHQ13203 477 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 BRD3Q15059 726 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 SMAD1Q15797 465 aaKnown RBP5.29□□□□□ -1.56
TUBE1-205ENST00000603651 ME3Q16798 604 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 ZNF672Q499Z4 452 aaPredicted RBP5.29□□□□□ -1.56
TUBE1-205ENST00000603651 FBXO43Q4G163 708 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 KRTAP5-11Q6L8G4 156 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 NCSTNQ92542 709 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 KTI12Q96EK9 354 aaPredicted RBP5.29□□□□□ -1.56
TUBE1-205ENST00000603651 MVB12BQ9H7P6 319 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 CLK4Q9HAZ1 481 aaKnown RBP5.29□□□□□ -1.56
TUBE1-205ENST00000603651 TCF7L2Q9NQB0 619 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 TMEM51Q9NW97 253 aa5.29□□□□□ -1.56
TUBE1-205ENST00000603651 SAA2-SAA4A0A096LPE2 208 aa5.28□□□□□ -1.56
TUBE1-205ENST00000603651 FAM157AC9JC47 383 aa5.28□□□□□ -1.56
TUBE1-205ENST00000603651 IPO5O00410 1097 aaKnown RBP5.28□□□□□ -1.56
TUBE1-205ENST00000603651 TIMM23O14925 209 aa5.28□□□□□ -1.56
TUBE1-205ENST00000603651 SNRNP70P08621 437 aaKnown RBP5.28□□□□□ -1.56
TUBE1-205ENST00000603651 CHAF1AQ13111 956 aaPredicted RBP5.28□□□□□ -1.56
TUBE1-205ENST00000603651 HDAC1Q13547 482 aaPredicted RBP5.28□□□□□ -1.56
TUBE1-205ENST00000603651 EFHC1Q5JVL4 640 aa5.28□□□□□ -1.56
TUBE1-205ENST00000603651 OTUD3Q5T2D3 398 aaPredicted RBP5.28□□□□□ -1.56
TUBE1-205ENST00000603651 JMJD6Q6NYC1 403 aaPredicted RBP5.28□□□□□ -1.56
TUBE1-205ENST00000603651 PATL1Q86TB9 770 aaKnown RBP5.28□□□□□ -1.56
TUBE1-205ENST00000603651 SPATA20Q8TB22 786 aa5.28□□□□□ -1.56
TUBE1-205ENST00000603651 MSTO1Q9BUK6 570 aa5.28□□□□□ -1.56
TUBE1-205ENST00000603651 DDX31Q9H8H2 851 aaKnown RBP5.28□□□□□ -1.56
TUBE1-205ENST00000603651 G6PC2Q9NQR9 355 aa5.28□□□□□ -1.56
TUBE1-205ENST00000603651 DONSONQ9NYP3 566 aa5.28□□□□□ -1.56
TUBE1-205ENST00000603651 SRP68Q9UHB9 627 aaKnown RBP5.28□□□□□ -1.56
TUBE1-205ENST00000603651 KCNG2Q9UJ96 466 aa5.28□□□□□ -1.56
TUBE1-205ENST00000603651 CLGNO14967 610 aa5.27□□□□□ -1.57
TUBE1-205ENST00000603651 CH25HO95992 272 aa5.27□□□□□ -1.57
TUBE1-205ENST00000603651 AARSP49588 968 aaKnown RBP eCLIP5.27□□□□□ -1.57
TUBE1-205ENST00000603651 PEX5P50542 639 aa5.27□□□□□ -1.57
TUBE1-205ENST00000603651 SNTA1Q13424 505 aa5.27□□□□□ -1.57
TUBE1-205ENST00000603651 XKR9Q5GH70 373 aa5.27□□□□□ -1.57
TUBE1-205ENST00000603651 TANGO2Q6ICL3 276 aa5.27□□□□□ -1.57
TUBE1-205ENST00000603651 TMPRSS12Q86WS5 348 aa5.27□□□□□ -1.57
TUBE1-205ENST00000603651 LURAP1LQ8IV03 231 aa5.27□□□□□ -1.57
TUBE1-205ENST00000603651 SETD9Q8NE22 299 aa5.27□□□□□ -1.57
TUBE1-205ENST00000603651 DNAAF1Q8NEP3 725 aa5.27□□□□□ -1.57
TUBE1-205ENST00000603651 OR4N2Q8NGD1 307 aa5.27□□□□□ -1.57
TUBE1-205ENST00000603651 NEK9Q8TD19 979 aa5.27□□□□□ -1.57
TUBE1-205ENST00000603651 AFG1LQ8WV93 481 aa5.27□□□□□ -1.57
TUBE1-205ENST00000603651 PAM16Q9Y3D7 125 aa5.27□□□□□ -1.57
TUBE1-205ENST00000603651 STX16-NPEPL1H3BU86 382 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 STX16O14662 325 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 TFPIP10646 304 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 RXRAP19793 462 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 CST5P28325 142 aaPredicted RBP5.26□□□□□ -1.57
TUBE1-205ENST00000603651 DCTDP32321 178 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 HTR3AP46098 478 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 POU3F1Q03052 451 aaPredicted RBP5.26□□□□□ -1.57
TUBE1-205ENST00000603651 LPIN1Q14693 890 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 RHBDF2Q6PJF5 856 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 MON1AQ86VX9 555 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 MB21D2Q8IYB1 491 aaPredicted RBP5.26□□□□□ -1.57
TUBE1-205ENST00000603651 PGBD5Q8N414 524 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 ANKRD44Q8N8A2 993 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 RNFT2Q96EX2 444 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 NODALQ96S42 347 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 EPYCQ99645 322 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 PAGR1Q9BTK6 254 aa5.26□□□□□ -1.57
TUBE1-205ENST00000603651 ATP8A2Q9NTI2 1148 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms