RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ERCC2P18074 760 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 AMPD1P23109 780 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ZNF157P51786 506 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-217ENST00000602723 DPYSQ14117 519 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 PTGES3Q15185 160 aaKnown RBP9.7□□□□□ -0.86
CSMD1-217ENST00000602723 HYIQ5T013 277 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 FNBP1LQ5T0N5 605 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 SPESP1Q6UW49 350 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-217ENST00000602723 GLT1D1Q96MS3 346 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 RSPH9Q9H1X1 276 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ATP13A1Q9HD20 1204 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 ATXN10Q9UBB4 475 aa9.7□□□□□ -0.86
CSMD1-217ENST00000602723 FAM237BA0A1B0GVD1 139 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 BNIP2Q12982 314 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 DOK6Q6PKX4 331 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 C3orf67Q6ZVT6 689 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 DNAJB14Q8TBM8 379 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 MAGEC3Q8TD91 643 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 POP5Q969H6 163 aaKnown RBP9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SLC47A1Q96FL8 570 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 KLHL32Q96NJ5 620 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 CRISPLD1Q9H336 500 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 ATXN3LQ9H3M9 355 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 TUBA8Q9NY65 449 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-217ENST00000602723 DKK3Q9UBP4 350 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 HACL1Q9UJ83 578 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SCAF8Q9UPN6 1271 aaKnown RBP9.69□□□□□ -0.86
CSMD1-217ENST00000602723 EVPLQ92817 2033 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 A0A0A0MRY4 1105 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SERPINA6P08185 405 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 MAPTP10636 758 aaKnown RBP9.69□□□□□ -0.86
CSMD1-217ENST00000602723 GCNT1Q02742 428 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 C5orf22Q49AR2 442 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 GPR107Q5VW38 600 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 TXNRD3Q86VQ6 643 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 TEX47Q8TBZ9 253 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SPATA13Q96N96 652 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 PCYOX1Q9UHG3 505 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 RTN3O95197 1032 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-217ENST00000602723 CCDC166P0CW27 439 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 MYL4P12829 197 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 YBX3P16989 372 aaKnown RBP eCLIP9.69□□□□□ -0.864e-6■□□□□ 11.2
CSMD1-217ENST00000602723 GLRA2P23416 452 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 CCDC36Q8IYA8 594 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SLC2A14Q8TDB8 520 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SGTAO43765 313 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 RLN1P04808 185 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 ITGAVP06756 1048 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SLC26A2P50443 739 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 RPS6KA3P51812 740 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 TRIT1Q9H3H1 467 aaKnown RBP9.69□□□□□ -0.86
CSMD1-217ENST00000602723 VPS4AQ9UN37 437 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 ACTL7BQ9Y614 415 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SAGE2PA6NJ88 616 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-217ENST00000602723 VIL1P09327 827 aaKnown RBP9.69□□□□□ -0.86
CSMD1-217ENST00000602723 UGT2B15P54855 530 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SPIBQ01892 262 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 AGMOQ6ZNB7 445 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 EIF1ADQ8N9N8 165 aaKnown RBP9.69□□□□□ -0.86
CSMD1-217ENST00000602723 C1QTNF7Q9BXJ2 289 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 DEFB129Q9H1M3 183 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 IQSEC2Q5JU85 1478 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 TFECO14948 347 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-217ENST00000602723 MLYCDO95822 493 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SOX10P56693 466 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 BHLHB9Q6PI77 547 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 RNF19BQ6ZMZ0 732 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 LZTR1Q8N653 840 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 BORCS5Q969J3 196 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SPATA5L1Q9BVQ7 753 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 DDX43Q9NXZ2 648 aaKnown RBP9.69□□□□□ -0.86
CSMD1-217ENST00000602723 GGA2Q9UJY4 613 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 DMTF1Q9Y222 760 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 FAM186AA6NE01 2351 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 FGF10O15520 208 aaPredicted RBP9.69□□□□□ -0.86
CSMD1-217ENST00000602723 ETS2P15036 469 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 POLR2LP62875 67 aaKnown RBP9.69□□□□□ -0.86
CSMD1-217ENST00000602723 LGI2Q8N0V4 545 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 STAG3L4Q8TBR4 150 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SELENOMQ8WWX9 145 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 YME1L1Q96TA2 773 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 VAT1Q99536 393 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 ZFP14Q9HCL3 533 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 RAPGEFL1Q9UHV5 662 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 DGKAP23743 735 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SLC6A3Q01959 620 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 PPATQ06203 517 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 DSG4Q86SJ6 1040 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 DAW1Q8N136 415 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SPATA20Q8TB22 786 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 ZNF398Q8TD17 642 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 HPS1Q92902 700 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 TCF12Q99081 682 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 SVILO95425 2214 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 TFRCP02786 760 aaKnown RBP9.69□□□□□ -0.86
CSMD1-217ENST00000602723 CD86P42081 329 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 ABCG1P45844 678 aa9.69□□□□□ -0.86
CSMD1-217ENST00000602723 RBBP4Q09028 425 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms