RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 MSANTD4Q8NCY6 345 aa18.31■□□□□ 0.52
CHMP2A-208ENST00000601220 TMEM248Q9NWD8 314 aa18.31■□□□□ 0.52
CHMP2A-208ENST00000601220 IGLON5A6NGN9 336 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 C16orf96A6NNT2 1141 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 EPHB6O15197 1021 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 GFPT2O94808 682 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 GJB6O95452 261 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 NME1P15531 152 aaKnown RBP18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 RHOQP17081 205 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 PTPN9P43378 593 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 MAPKAPK2P49137 400 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 TBC1D25Q3MII6 688 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 KDM7AQ6ZMT4 941 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 PTAR1Q7Z6K3 402 aaPredicted RBP18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 SLC30A5Q8TAD4 765 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 GPT2Q8TD30 523 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 ASB12Q8WXK4 309 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 UBL7Q96S82 380 aaPredicted RBP18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 PCDHB18PQ96TA0 734 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 TM6SF2Q9BZW4 377 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 DNAJC28Q9NX36 388 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 TAB2Q9NYJ8 693 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 DACH1Q9UI36 760 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 DNAI1Q9UI46 699 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 GGT7Q9UJ14 662 aa18.3■□□□□ 0.52
CHMP2A-208ENST00000601220 PES1O00541 588 aaKnown RBP18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 TSPAN6O43657 245 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 NEBLO76041 1014 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 LRIG2O94898 1065 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 GSRP00390 522 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 GP1BAP07359 652 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 UNGP13051 313 aaPredicted RBP18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 RABIFP47224 123 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 HDAC4P56524 1084 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 PFN3P60673 137 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 HNRNPKP61978 463 aaKnown RBP eCLIP18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 CDO1Q16878 200 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 ZNF805Q5CZA5 627 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 CDKAL1Q5VV42 579 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 LRRC69Q6ZNQ3 347 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 STRADAQ7RTN6 431 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 ZSCAN30Q86W11 494 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 CCDC185Q8N715 623 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 ZNF548Q8NEK5 533 aaPredicted RBP18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 OR6K2Q8NGY2 324 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 RAB7BQ96AH8 199 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 MAGEH1Q9H213 219 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 NOL6Q9H6R4 1146 aaKnown RBP18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 ZDHHC6Q9H6R6 413 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 USP29Q9HBJ7 922 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 CHMP5Q9NZZ3 219 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 CSNK1G3Q9Y6M4 447 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 DOCK4Q8N1I0 1966 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 MYLKQ15746 1914 aa18.29■□□□□ 0.52
CHMP2A-208ENST00000601220 NEMP2A6NFY4 417 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 AREL1O15033 823 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 RRP8O43159 456 aaKnown RBP18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 LZTS3O60299 673 aaPredicted RBP18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 PLEKP08567 350 aaPredicted RBP18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 SDC4P31431 198 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 ACTN2P35609 894 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 SOX5P35711 763 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 ETFBP38117 255 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 GSCP56915 257 aaPredicted RBP18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 EIF2B5Q13144 721 aaKnown RBP18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 MYLK3Q32MK0 819 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 ARL13BQ3SXY8 428 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 HS1BP3Q53T59 392 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 RWDD4Q6NW29 188 aaKnown RBP18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 LEKR1Q6ZMV7 388 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 PARGQ86W56 976 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 OR2AP1Q8NGE2 309 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 ENOX1Q8TC92 643 aaKnown RBP18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 CENPTQ96BT3 561 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 C11orf70Q9BRQ4 267 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 DUSP23Q9BVJ7 150 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 NUP62CLQ9H1M0 184 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 VPS16Q9H269 839 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 PNMA8BQ9ULN7 279 aaPredicted RBP18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 ITM2BQ9Y287 266 aa18.28■□□□□ 0.52
CHMP2A-208ENST00000601220 KDELR3O43731 214 aa18.27■□□□□ 0.52
CHMP2A-208ENST00000601220 ALPPL2P10696 532 aa18.27■□□□□ 0.52
CHMP2A-208ENST00000601220 RFC1P35251 1148 aaPredicted RBP18.27■□□□□ 0.52
CHMP2A-208ENST00000601220 POLR2FP61218 127 aaKnown RBP18.27■□□□□ 0.52
CHMP2A-208ENST00000601220 TLE3Q04726 772 aa18.27■□□□□ 0.52
CHMP2A-208ENST00000601220 PDE1CQ14123 709 aaPredicted RBP18.27■□□□□ 0.52
CHMP2A-208ENST00000601220 KRT31Q15323 416 aa18.27■□□□□ 0.52
CHMP2A-208ENST00000601220 DENND6BQ8NEG7 585 aa18.27■□□□□ 0.52
CHMP2A-208ENST00000601220 BAP1Q92560 729 aa18.27■□□□□ 0.52
CHMP2A-208ENST00000601220 NTAN1Q96AB6 310 aa18.27■□□□□ 0.52
CHMP2A-208ENST00000601220 HIC2Q96JB3 615 aa18.27■□□□□ 0.52
CHMP2A-208ENST00000601220 SIK3Q9Y2K2 1263 aa18.27■□□□□ 0.52
CHMP2A-208ENST00000601220 TCRBV5S1A1TA0A578 114 aa18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 FPGTO14772 594 aa18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 ATXN7O15265 892 aaPredicted RBP18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 RAMP2O60895 175 aa18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 DXOO77932 396 aaKnown RBP18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 POP4O95707 220 aaKnown RBP18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 GEMIN4P57678 1058 aaKnown RBP18.26■□□□□ 0.51
CHMP2A-208ENST00000601220 SGCGQ13326 291 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms