RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 DCAF12L1Q5VU92 463 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.3□□□□□ -0.44
ZNF548-209ENST00000598895 IFT20Q8IY31 132 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 RYBPQ8N488 228 aaPredicted RBP12.3□□□□□ -0.44
ZNF548-209ENST00000598895 AADATQ8N5Z0 425 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 OR2A12Q8NGT7 310 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 OR6K2Q8NGY2 324 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 PIP4K2CQ8TBX8 421 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 GRIN3AQ8TCU5 1115 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.3□□□□□ -0.44
ZNF548-209ENST00000598895 CAVIN3Q969G5 261 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 TM6SF2Q9BZW4 377 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 BTBD1Q9H0C5 482 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 NEUROG2Q9H2A3 272 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 KLHL11Q9NVR0 708 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 GOLGA6AQ9NYA3 693 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 TFR2Q9UP52 801 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 MFHAS1Q9Y4C4 1052 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 ADAMTS9Q9P2N4 1935 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 CHD5Q8TDI0 1954 aa12.3□□□□□ -0.44
ZNF548-209ENST00000598895 H3BRJ5 948 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 PDE2AO00408 941 aaPredicted RBP12.29□□□□□ -0.44
ZNF548-209ENST00000598895 KPNA3O00505 521 aaPredicted RBP12.29□□□□□ -0.44
ZNF548-209ENST00000598895 MCF2LO15068 1137 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 KDELR3O43731 214 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 LRP3O75074 770 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 PROSCO94903 275 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 FSBPO95073 299 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 SEMA4FO95754 770 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 ADH1BP00325 375 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 CTSLP07711 333 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 AMPD1P23109 780 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 GKP32189 559 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 CHRNA3P32297 505 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 RECQLP46063 649 aaPredicted RBP12.29□□□□□ -0.44
ZNF548-209ENST00000598895 VASPP50552 380 aaPredicted RBP12.29□□□□□ -0.44
ZNF548-209ENST00000598895 TAS2R40P59535 323 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 SLC25A11Q02978 314 aaKnown RBP12.29□□□□□ -0.44
ZNF548-209ENST00000598895 KRT81Q14533 505 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 ATP13A4Q4VNC1 1196 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 TRIM61Q5EBN2 209 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 C8orf74Q6P047 294 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 DPY19L3Q6ZPD9 716 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 DSG4Q86SJ6 1040 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 SYT12Q8IV01 421 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 NPWQ8N729 165 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 NIPA2Q8N8Q9 360 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 SLC35G2Q8TBE7 412 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 ZNF419Q96HQ0 510 aaPredicted RBP12.29□□□□□ -0.44
ZNF548-209ENST00000598895 CCDC114Q96M63 670 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 NCAPGQ9BPX3 1015 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 SLC39A8Q9C0K1 460 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 UVRAGQ9P2Y5 699 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 PILRBQ9UKJ0 227 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 SDK1Q7Z5N4 2213 aa12.29□□□□□ -0.44
ZNF548-209ENST00000598895 GPR179Q6PRD1 2367 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 METTL12A8MUP2 240 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 BTNL10A8MVZ5 291 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 WASH4PA8MWX3 477 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 C1QTNF3-AMACRE9PGA6 284 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 J3KR12 359 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 DFFAO00273 331 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 KHNYNO15037 678 aaKnown RBP12.28□□□□□ -0.44
ZNF548-209ENST00000598895 ZNF821O75541 412 aaPredicted RBP12.28□□□□□ -0.44
ZNF548-209ENST00000598895 CD48P09326 243 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 C5AR1P21730 350 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 DRD3P35462 400 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 ARL4AP40617 200 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 PAPOLAP51003 745 aaKnown RBP12.28□□□□□ -0.44
ZNF548-209ENST00000598895 CDH6P55285 790 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 YBEYP58557 167 aaPredicted RBP12.28□□□□□ -0.44
ZNF548-209ENST00000598895 IRX4P78413 519 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 LMNB2Q03252 620 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 CNTN1Q12860 1018 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 MMRN1Q13201 1228 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 DPYSL2Q16555 572 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 HADHQ16836 314 aaKnown RBP12.28□□□□□ -0.44
ZNF548-209ENST00000598895 RSPO4Q2I0M5 234 aaPredicted RBP12.28□□□□□ -0.44
ZNF548-209ENST00000598895 BOLA3Q53S33 107 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 CARD16Q5EG05 197 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 DNAJC21Q5F1R6 531 aaKnown RBP12.28□□□□□ -0.44
ZNF548-209ENST00000598895 ARSIQ5FYB1 569 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 SPDYCQ5MJ68 293 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 ZFYVE27Q5T4F4 411 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 SYCP2LQ5T4T6 812 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 ATXN7L2Q5T6C5 722 aaPredicted RBP12.28□□□□□ -0.44
ZNF548-209ENST00000598895 USP30Q70CQ3 517 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 TP53INP2Q8IXH6 220 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 UMODL1-AS1Q8N2C9 162 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 ZCCHC9Q8N567 271 aaKnown RBP12.28□□□□□ -0.44
ZNF548-209ENST00000598895 EIF1ADQ8N9N8 165 aaKnown RBP12.28□□□□□ -0.44
ZNF548-209ENST00000598895 OR14C36Q8NHC7 312 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 FOXJ1Q92949 421 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 RMDN1Q96DB5 314 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 EDEM2Q9BV94 578 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 RETREG1Q9H6L5 497 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 ZDHHC6Q9H6R6 413 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 PCDH18Q9HCL0 1135 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 ETNK2Q9NVF9 386 aa12.28□□□□□ -0.44
ZNF548-209ENST00000598895 IL36AQ9UHA7 158 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms