RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 MPOP05164 745 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 CKMT1AP12532 417 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 RPS21P63220 83 aaKnown RBP12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 TBC1D25Q3MII6 688 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 CCDC14Q49A88 953 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 TCP11X2Q5H9J9 407 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 ATXN7L2Q5T6C5 722 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 KIAA1161Q6NSJ0 714 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 RWDD4Q6NW29 188 aaKnown RBP12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 CRTC1Q6UUV9 634 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 ZNF783Q6ZMS7 281 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 LRRC69Q6ZNQ3 347 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 CLEC17AQ6ZS10 378 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 NLRP14Q86W24 1093 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 RBFAQ8N0V3 343 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 ZNF548Q8NEK5 533 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 ARHGEF2Q92974 986 aaKnown RBP12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 NAF1Q96HR8 494 aaKnown RBP12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 FCRL3Q96P31 734 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 GBP4Q96PP9 640 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 KLF6Q99612 283 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 NUP62CLQ9H1M0 184 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 VPS16Q9H269 839 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 TCEAL2Q9H3H9 227 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 NLRC4Q9NPP4 1024 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 NLGN3Q9NZ94 848 aa12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 PPARGC1AQ9UBK2 798 aaKnown RBP12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 PNMA8BQ9ULN7 279 aaPredicted RBP12.31□□□□□ -0.44
SOX2-OT-228ENST00000597828 IGLON5A6NGN9 336 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 C2CD4BA6NLJ0 364 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 C16orf96A6NNT2 1141 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 OPA1O60313 960 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 C1QL1O75973 258 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 LRIG2O94898 1065 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 UGT2B4P06133 528 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 NME1P15531 152 aaKnown RBP12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 ITIH2P19823 946 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 ERCC5P28715 1186 aaPredicted RBP12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 HDAC4P56524 1084 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 POLR2FP61218 127 aaKnown RBP12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 CCDC15Q0P6D6 951 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 PDE1CQ14123 709 aaPredicted RBP12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 HS1BP3Q53T59 392 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 CDCP2Q5VXM1 449 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 SMYD5Q6GMV2 418 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 SPACA3Q8IXA5 215 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 MSANTD4Q8NCY6 345 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 UBL7Q96S82 380 aaPredicted RBP12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 PCDHB18PQ96TA0 734 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 STK33Q9BYT3 514 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 KLC2Q9H0B6 622 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 OSBPL2Q9H1P3 480 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 FAM207AQ9NSI2 230 aaPredicted RBP12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 OR12D3Q9UGF7 316 aa12.3□□□□□ -0.44
SOX2-OT-228ENST00000597828 COL6A6A6NMZ7 2263 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 SPTY2D1-AS1A0A0U1RR47 76 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 EIF4E1BA6NMX2 242 aaKnown RBP12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 KRIT1O00522 736 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 SCAMP1O15126 338 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 RRP8O43159 456 aaKnown RBP12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 AP1G1O43747 822 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 CSO75390 466 aaKnown RBP12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 ZIC2O95409 532 aaPredicted RBP12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 ALPPL2P10696 532 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 TGM2P21980 687 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 MMP8P22894 467 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 SDC4P31431 198 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 ADRA1BP35368 520 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 IGFALSP35858 605 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 JAM2P57087 298 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 HNRNPKP61978 463 aaKnown RBP eCLIP12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 GABREP78334 506 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 E2F1Q01094 437 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 CDR2Q01850 454 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 TLE3Q04726 772 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 SLC20A2Q08357 652 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 PTP4A2Q12974 167 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 EIF2B5Q13144 721 aaKnown RBP12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 KRT31Q15323 416 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 CDKN3Q16667 212 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 DEFB133Q30KQ1 61 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 GUSBP11Q6P575 273 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 ARCQ7LC44 396 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 PARGQ86W56 976 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 CACTIN-AS1Q8N1I8 211 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 PYROXD2Q8N2H3 581 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 IFI44Q8TCB0 444 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 FAM172AQ8WUF8 416 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 BAP1Q92560 729 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 FGF11Q92914 225 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 FEM1CQ96JP0 617 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 KLHL32Q96NJ5 620 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 NOL6Q9H6R4 1146 aaKnown RBP12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 TMEM248Q9NWD8 314 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 DACH1Q9UI36 760 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 HS3ST3A1Q9Y663 406 aa12.29□□□□□ -0.44
SOX2-OT-228ENST00000597828 A0A1W2PNU3 283 aaPredicted RBP12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 PMS2P1A4D2B8 440 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 USP12O75317 370 aa12.28□□□□□ -0.44
SOX2-OT-228ENST00000597828 TMCC1O94876 653 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms